TCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCTGAGCATGTTCCTGAGTAGGTCTCTATTTTTTGTGCCTTCCCCTG
GACACTTTTCCTTCTATGTGTTTGTTTTGTTCAATTCCAATGTGATTGTT
TTTGTTTTATCATTTTGTGTTATTTAATTTTTATCCGTTAGAAAATCCAT
TTGTTTTCTAATTAAAGACAGAAAGGGATTGGATCCACATGAATGAAAAG
CAGGTGCAGAGGAAATTGGAGGAGGAGAAGGCAGAGGAAACCATAATCAG
GTTATATTATTTAAAGAAAAAAAACCACCGTTTTTTGTTTTGTTTTGTAT
TTCTGTTTTCTTAAAATTAAATTATTCTCTCACACAATATATACTGGTTA
CACTTTCTCCTCCCCCTACTCCTCCCAGTTCTTCTTTATCTTCCCTCCCA
TCTGTACACACTTCCTTTCTTTCAATAGAAAAACAAAACAAAACAAAACA
GTACATTGAAGTTGACAAAGCAAACCAGCAAAAGGAAAAGTGTCCCAAAA
GAAGGCATCAAAACCAGAGATCCACTTTTTCACTCACTTCGGAAGTCCAA
TAAAAAGACTAAACTGAAATCTATAACTTATAAACATAATCTGGTATGCA
CCATGTAAGTCCTGTACTTGCTGTTTCAGTCCCTGTGAGTCCCTATGAGC
TTTTGATTAGTTTATTTGCACATCTTTGTTCTATTGCTCTGTTTCCTCT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTGTGCTTGGTAATGTTGGAAGAC
TTTGGATGTTAGTTACAAGACCCTTTCATTCCTCCAGGCAGCCATCAAAG
TTAAGCAGTTAATAAAAGCCTGGCTGCAGCTAATGTTGGAAAGCATCTGT
TCACAGCTGCTGGAGGAGTTGTTCTCAATTAAAATTTGTAATAATTATTT
GTACAGTCAACATCTTCTGTAGCTAAATTAGTCTGGTTTGGGTCAAAACT
AATTTGAAACGATAGCACGCCTTTTCATATCTCGTATTTTACTAAATGGC
TTCTCCCTTTGTGGTTTGTGATAAATCAGGACAGAACATATTTAATATAA
GGCTCAATTGATATAAAAGCTGATGGAGCCCATTTTCTATATTATCCCTT
ATTTGAAATGCATATTTGTTTTAGCAGAGATCTGGAACAAATTTACAAAA
GCATGACATTTGCACAAACACATGTTTCTCTATTAGAGAAATGACAATCT
CGAACAAATGTTATAGAAAATTTGACTATGTACATGTGGAAGACTGAATA
TTGGCCTCATATGCCATCCGTTTAAACAAAAGCCAACTTACAATGGACCT
GAAATTTTGAAATTATCAGGTAAATAATAAACACCGCACAGTTTACAACA
TGAATCAGAGAAATTTTTTTTTTTTCTGTTATAATATTTATCTGCCATCT
A

Query= MSMg01no406_n03.g1 MSMg01no406_n03.g1 CHROMAT_FILE:
MSMg01no406_n03.g1 PHD_FILE: MSMg01no406_n03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:22:16 2005
         (511 letters)



>mm_chr17_93967678_93968588
          Length = 911

 Score =  980 bits (507), Expect = 0.0
 Identities = 510/511 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttgtgcttggtaatgttggaagactttggatgttagttacaagaccctttcattcctcca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgtgcttggtaatgttggaagactttggatgttagttacaagaccctttcattcctcca 260

                                                                       
Query: 61  ggcagccatcaaagttaagcagttaataaaagcctggctgcagctaatgttggaaagcat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggcagccatcaaagttaagcagttaataaaagcctggctgcagctaatgttggaaagcat 320

                                                                       
Query: 121 ctgttcacagctgctggaggagttgttctcaattaaaatttgtaataattatttgtacag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgttcacagctgctggaggagttgttctcaattaaaatttgtaataattatttgtacag 380

                                                                       
Query: 181 tcaacatcttctgtagctaaattagtctggtttgggtcaaaactaatttgaaacgatagc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcaacatcttctgtagctaaattagtctggtttgggtcaaaactaatttgaaacgatagc 440

                                                                       
Query: 241 acgccttttcatatctcgtattttactaaatggcttctccctttgtggtttgtgataaat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acgccttttcatatctcgtattttactaaatggcttctccctttgtggtttgtgataaat 500

                                                                       
Query: 301 caggacagaacatatttaatataaggctcaattgatataaaagctgatggagcccatttt 360
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caagacagaacatatttaatataaggctcaattgatataaaagctgatggagcccatttt 560

                                                                       
Query: 361 ctatattatcccttatttgaaatgcatatttgttttagcagagatctggaacaaatttac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctatattatcccttatttgaaatgcatatttgttttagcagagatctggaacaaatttac 620

                                                                       
Query: 421 aaaagcatgacatttgcacaaacacatgtttctctattagagaaatgacaatctcgaaca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaaagcatgacatttgcacaaacacatgtttctctattagagaaatgacaatctcgaaca 680

                                          
Query: 481 aatgttatagaaaatttgactatgtacatgt 511
           |||||||||||||||||||||||||||||||
Sbjct: 681 aatgttatagaaaatttgactatgtacatgt 711


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 911
Length adjustment: 10
Effective length of query: 501
Effective length of database: 901
Effective search space:   451401
Effective search space used:   451401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)