Query= MSMg01no408_g09.b1 MSMg01no408_g09.b1 CHROMAT_FILE:
MSMg01no408_g09.b1 PHD_FILE: MSMg01no408_g09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:24:22 2005
(582 letters)
>mm_chr17_22676652_22677632
Length = 981
Score = 1056 bits (546), Expect = 0.0
Identities = 573/582 (98%), Gaps = 1/582 (0%)
Strand = Plus / Minus
Query: 1 aagtacgtctcactagaaagctcagtatcactagatactgcattaatgttatttgttctg 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 aagtacttctcactagaaagctcagtatcactagatactgcattaatgttatttgttctg 722
Query: 61 aaaaacaaatttaaaacaactactgcaattcttgaccatacaatttatgtacagagtaga 120
||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 721 aaaaacaaaattaaaacaactactgcaattcttgaccatacaatttctgtacagagtaga 662
Query: 121 gtgagcaagttctaggcattgccatttttcctgaatgaagaatacagccataaggaacgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gtgagcaagttctaggcattgccatttttcctgaatgaagaatacagccataaggaacgt 602
Query: 181 catcaagtcctataattcaatgaaaatatttgagctatctgtattggtacagttcttcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 catcaagtcctataattcaatgaaaatatttgagctatctgtattggtacagttcttcaa 542
Query: 241 tcctagcatcctatgtaagaggaagggaaatcccatgtaaatccaggcttgatctagtgc 300
||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 541 tcctagcatccta-ggaagaggaagggagttcccatgtaaatccaggcttgatctagtgc 483
Query: 301 cacaatagcattatatctatttttgcatacaagtgataaaggaaatcatcttttagatta 360
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 cacaatagcattatacctatttttgcatacaagtgataaaggaaatcatcttttagatta 423
Query: 361 ttcttctgtaaagatcctggcaagtattagataaatagaataatcctcataaaaccaagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ttcttctgtaaagatcctggcaagtattagataaatagaataatcctcataaaaccaagt 363
Query: 421 tattattatctaaagattactaacagggccagaggtacccacttcagaataatgtgtgcc 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tattattatctaaagattactaacagggccagaggtacccacttcagaataatgtgtgct 303
Query: 481 taaattgtgacacagcagattttacctctggtgaatacaatatacctatttggcagcact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 taaattgtgacacagcagattttacctctggtgaatacaatatacctatttggcagcact 243
Query: 541 gttcatcaattggacttcttcccttgcatccatggcagagct 582
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gttcatcaattggacttcttcccttgcatccatggcagagct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 582
Length of database: 981
Length adjustment: 10
Effective length of query: 572
Effective length of database: 971
Effective search space: 555412
Effective search space used: 555412
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no408_g09.g1 MSMg01no408_g09.g1 CHROMAT_FILE:
MSMg01no408_g09.g1 PHD_FILE: MSMg01no408_g09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:24:22 2005
(495 letters)
>mm_chr17_22791733_22792626
Length = 894
Score = 439 bits (227), Expect = e-127
Identities = 233/235 (99%), Gaps = 1/235 (0%)
Strand = Plus / Plus
Query: 261 aaaagttcatgttggaaaaaaaaagtatttacttgtttcatgttgttttggattcatgtc 320
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 461 aaaagttcatgttggaaaaaaaa-gtatttacttgtttcatgttgttttggattcatgtc 519
Query: 321 tgatcaaaagttagaattttcacactagagaaccccaagaaatgtaaggaatttgtcaaa 380
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 tgatcaaaagttagaatcttcacactagagaaccccaagaaatgtaaggaatttgtcaaa 579
Query: 381 cctttataaagtaaataaaatttaataccacctgaaagcttttccttcaggaaacccttt 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 cctttataaagtaaataaaatttaataccacctgaaagcttttccttcaggaaacccttt 639
Query: 441 cttgtgctttattaattatgtggcattcagctttagaatttgcattctggagtag 495
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 cttgtgctttattaattatgtggcattcagctttagaatttgcattctggagtag 694
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 894
Length adjustment: 10
Effective length of query: 485
Effective length of database: 884
Effective search space: 428740
Effective search space used: 428740
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|