Query= MSMg01no409_k21.b1 MSMg01no409_k21.b1 CHROMAT_FILE:
MSMg01no409_k21.b1 PHD_FILE: MSMg01no409_k21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:26:07 2005
(491 letters)
>mm_chr17_57585112_57586002
Length = 891
Score = 868 bits (449), Expect = 0.0
Identities = 470/477 (98%), Gaps = 1/477 (0%)
Strand = Plus / Minus
Query: 4 ggaattcctacggctctgcttctggttgatgtctatagtttagtataaagagaactttgg 63
||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 ggaattcctacagctcagtttctggttgatgtctatagtttagtataaagagaactttgg 417
Query: 64 ggccaggctatctcaaagttcaggtcctacctccactagtcactaactacatgatgagac 123
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 416 ggccaggctatctcaaagttcaggtcctacctccactagtcactaattacatgatgagac 357
Query: 124 atgacactgagcatcaatcttctgtcccatgaaacttgaaattgaccaattaataattag 183
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 atgacactgaacatcaatcttctgtcccatgaaacttgaaattgaccaattaataattag 297
Query: 184 cttcaagcaagaagtcctagatcattaagctccttgttagtaactcttcattaaatgaga 243
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 tttcaagcaagaagtcctagatcattaagctccttgttagtaactcttcattaaatgaga 237
Query: 244 cctgtgaaatattgggtatgtttgattatagtctgtgacagttcattttggtagtcaact 303
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 cctgtgaaatattgggtatgtttgattatagtctgtgacagttcattttggtagtcaac- 178
Query: 304 tgggtaaatcacaagtctactaagagatcaactattgggcacatccttgagaaatattat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 tgggtaaatcacaagtctactaagagatcaactattgggcacatccttgagaaatattat 118
Query: 364 tgatcaagttatttgaggtgggaagatccagcctagacaaaaaaggtctaaggcaaaaga 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 tgatcaagttatttgaggtgggaagatccagcctagacaaaaaaggtctaaggcaaaaga 58
Query: 424 tttgctttttgcctcattgccttcacatcttgctggcaagttcatctattctgatat 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57 tttgctttttgcctcattgccttcacatcttgctggcaagttcatctattctgatat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 491
Length of database: 891
Length adjustment: 10
Effective length of query: 481
Effective length of database: 881
Effective search space: 423761
Effective search space used: 423761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no409_k21.g1 MSMg01no409_k21.g1 CHROMAT_FILE:
MSMg01no409_k21.g1 PHD_FILE: MSMg01no409_k21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:26:08 2005
(175 letters)
>mm_chr17_57431766_57432340
Length = 575
Score = 327 bits (169), Expect = 3e-94
Identities = 172/173 (99%)
Strand = Plus / Plus
Query: 1 actgaggccccattgtcacttcagacagttatgacatggtatgatcaataccatgcattt 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actgaggtcccattgtcacttcagacagttatgacatggtatgatcaataccatgcattt 260
Query: 61 attagtagagacttagacactggaacatgtaggttgatggagaactgtgcacatcatggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attagtagagacttagacactggaacatgtaggttgatggagaactgtgcacatcatggt 320
Query: 121 gatgcgtgtgattgatgggaatggagagggtgataatggtgataatggtgatg 173
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatgcgtgtgattgatgggaatggagagggtgataatggtgataatggtgatg 373
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 175
Length of database: 575
Length adjustment: 8
Effective length of query: 167
Effective length of database: 567
Effective search space: 94689
Effective search space used: 94689
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
