NTTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGAGGATCCGCG
GAATTCTCACCTGATGACTACCGAATGGCAGAGAAACACCTGAAAAAATG
CTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGAT
TCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGC
AGATGCTGGTGTGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTG
GGATTGCAGGCTTTTACAACCACTCTGGAAATCCGTCTGGCGGTTCCTCA
GAAAATTGGACATAGTACTACCGGAGGATCCAGCAATACCTCTCCTGGGC
ATATATCCAGAAGATGCCCCAACTAGTAAGAAGGACACGTGCTCCACTAT
GTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCTAGAT
GCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACACAATG
GAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGCCAA
ATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAAA
GAAACTCACACAATATGTACTCACTGATAAGTGGATATTAGCCCCCAAAC
CTAGGATACCCAAGATATAAGATATAATTTTGCTAAACACATGGAACTCC
AGAACAATGAAAACTTGACTGGTGAACTCTATGCCCCTCCTTATATTTGG
GAAAACAATCCCCC

NCCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCCCACACAACACTTCGTACA
GAATCAGCAAGGCTCTATTATCCACAGAATGGAAAGTAATAATTCCCACA
GCCAGACAGATCTATATTTATAAGTATAGATCACACAAACACATCTATAC
TTATAAGTATCAAGCACAACAGTTTTCAGAAGAGAATATGGGTATTTTCA
AGGATAAATGATGAATATATTTGCTCTATTTCAATTTTCATAAGCCAATA
TACTGTCTTAAAAGGGTGTCAAGAAATATTTTTCATGTATCTTTTAGCTA
CAGCATATTTTAGAATGCTACTCTACCAATTTCCACGAGTAAAATTAATT
TATAATATATGCTGTGGTCTAAGTTGACACACGTTCATTTATCTATACAT
AAGGGTATATTTTTGACAAATAAAATAAAGAAAAACAGGAGTACACGAGA
ACAGAGGCAGACACNAAAGAGGAAACACAAAAATACCTTCGAGAATTAAA
GGAAAACACAACCAAACAGGTAAAGGAATTGAACAAAAACATCCAGGACC
AAAAATGAAAATAGACACAAAGAAATCACAAATGCGGACATAATTGGAGA
TAGAAAATCTAGGAAAGAGATCAGGGAGCCTAAGGTCAAGGCTTTCCCCC
NNNATTCCCNAGATAGAAGAGAGAATCCCCCGGGGCGAAGAATAACTTAT
AAAACTTCGGCGCCACCCAA

Query= MSMg01no410_f20.g1 MSMg01no410_f20.g1 CHROMAT_FILE:
MSMg01no410_f20.g1 PHD_FILE: MSMg01no410_f20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:05 2005
         (474 letters)



>mm_chr17_90617935_90618808
          Length = 874

 Score =  895 bits (463), Expect = 0.0
 Identities = 471/474 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   cccacacaacacttcgtacagaatcagcaaggctctattatccacagaatggaaagtaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cccacacaacacttcgtacagaatcagcaaggctctattatccacagaatggaaagtaat 260

                                                                       
Query: 61  aattcccacagccagacagatctatatttataagtatagatcacacaaacacatctatac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aattcccacagccagacagatctatatttataagtatagatcacacaaacacatctatac 320

                                                                       
Query: 121 ttataagtatcaagcacaacagttttcagaagagaatatgggtattttcaaggataaatg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttataagtatcaagcacaacagttttcagaagagaatatgggtattttcaaggataaatg 380

                                                                       
Query: 181 atgaatatatttgctctatttcaattttcataagccaatatactgtcttaaaagggtgtc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgaatatatttgctctatttcaattttcataagccaatatactgtcttaaaagggtgtc 440

                                                                       
Query: 241 aagaaatatttttcatgtatcttttagctacagcatattttagaatgctactctaccaat 300
           |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagaaatagttttcacgtatcttttagctacagcatattttagaatgctactctaccaat 500

                                                                       
Query: 301 ttccacgagtaaaattaatttataatatatgctgtggtctaagttgacacacgttcattt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttccacgagtaaaattaatttataatatatgctgtggtctaagttgacacacgttcattt 560

                                                                       
Query: 361 atctatacataagggtatatttttgacaaataaaataaagaaaaacaggagtacacgaga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atctatacataagggtatatttttgacaaataaaataaagaaaaacaggagtacacgaga 620

                                                                 
Query: 421 acagaggcagacacnaaagaggaaacacaaaaataccttcgagaattaaaggaa 474
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acagaggcagacacaaaagaggaaacacaaaaataccttcgagaattaaaggaa 674


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 874
Length adjustment: 10
Effective length of query: 464
Effective length of database: 864
Effective search space:   400896
Effective search space used:   400896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)