Query= MSMg01no410_k11.b1 MSMg01no410_k11.b1 CHROMAT_FILE:
MSMg01no410_k11.b1 PHD_FILE: MSMg01no410_k11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:27 2005
(249 letters)
>mm_chr17_68909324_68909972
Length = 649
Score = 466 bits (241), Expect = e-136
Identities = 247/249 (99%)
Strand = Plus / Plus
Query: 1 tctttaagcaccccatgataattttatctcatacaacaaattataaaattttcaaaaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctttaagcaccccatgataattttatctcatacaacaaattataaaattttcaaaaaat 260
Query: 61 attaaatattcaaaacctcaggaattttaaaaataaaagtgaaggagcattctattttgc 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attaaatattcaaaacttcaggaattttaaaaataaaagtgaaggagcattctattttgc 320
Query: 121 tgggacctgcattatttctgtctttgtagccacttacagctaaggaggaaattaaacact 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgggacctgcattatttctgcctttgtagccacttacagctaaggaggaaattaaacact 380
Query: 181 ctaaattctaatgagtctctgactagaataccttattttgtctgagggagtcctctgacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctaaattctaatgagtctctgactagaataccttattttgtctgagggagtcctctgacc 440
Query: 241 caattaggc 249
|||||||||
Sbjct: 441 caattaggc 449
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no410_k11.g1 MSMg01no410_k11.g1 CHROMAT_FILE:
MSMg01no410_k11.g1 PHD_FILE: MSMg01no410_k11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:27 2005
(463 letters)
>mm_chr17_69091107_69091970
Length = 864
Score = 801 bits (414), Expect = 0.0
Identities = 453/474 (95%), Gaps = 15/474 (3%)
Strand = Plus / Minus
Query: 5 ggtacaatgggaataaagctctgcctcgggaaacaggctcagaacagcaccttctctgta 64
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 864 ggtacaatgggaataaagctctgccttgggaaacaggctcagaacagcaccttctctgta 805
Query: 65 tacattaaataaacaagacttctcaaaatcatggaatttgaaagtgtatgctcatatgct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 tacattaaataaacaagacttctcaaaatcatggaatttgaaagtgtatgctcatatgct 745
Query: 125 caggatggtgaaagaacttttatttttaaactaaaccgggacacattgtttaaggcaa-- 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 caggatggtgaaagaacttttatttttaaactaaaccgggacacattgtttaaggcaagt 685
Query: 183 -----gttaaatc-------ttttttttttttttttgctttatattgttttaagattggg 230
|||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 taaatgttaaatctttttttttttttttttttttttgctttatattgttttaagattggg 625
Query: 231 tataatcacaaattggttttaatttacagccagtgagttttgctgcttatagatcatcaa 290
||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tataatcacaaattggtgtcaatttacagccagtgagttttgctgcttatagatcatcaa 565
Query: 291 gtaatgttatcaagagaatactctaagaagaa-ttttataagattataccatggtaacaa 349
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 564 gtaatgttatcaagagaatactctaagaagaatttttataagattataccatggtaacaa 505
Query: 350 aaattacttaatcccattggttatttcagtttaagtggtaaaactagtgaaaaatggaat 409
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aaattacttagtcccattggttatttcagtttaagtggtaaaactagtgaaaaatggaat 445
Query: 410 tgtaattagtcaatcattcccgactagggcacaatataaggaagcaatgtgtct 463
||||||||||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 444 tgtaattagtcaatcattccctactagggcacaatataagaaagcaatgtgtct 391
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 463
Length of database: 864
Length adjustment: 10
Effective length of query: 453
Effective length of database: 854
Effective search space: 386862
Effective search space used: 386862
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
