Query= MSMg01no412_e24.b1 MSMg01no412_e24.b1 CHROMAT_FILE:
MSMg01no412_e24.b1 PHD_FILE: MSMg01no412_e24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:38 2005
(521 letters)
>mm_chr17_69620275_69621195
Length = 921
Score = 880 bits (455), Expect = 0.0
Identities = 470/475 (98%)
Strand = Plus / Minus
Query: 4 ggaattcatttcctgtgcgtgacttgtgtgatagccaagggctcgaaaatgtgttaagta 63
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 ggaattcatttcctgggagtgacttgtgtgatagccaagggctcgaaaatgtgttaagta 416
Query: 64 ttactttaataagtattagatggccaccggggatttaaaaatatatctgtatccagccaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 ttactttaataagtattagatggccaccggggatttaaaaatatatctgtatccagccaa 356
Query: 124 taagctaattcaattacccatgaatcttcgtcctcatctgtcatggctgctagtatacac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 taagctaattcaattacccatgaatcttcgtcctcatctgtcatggctgctagtatacac 296
Query: 184 agactcctatctgagacaggagaatcactgtctacctctctttcctccccgcctggtcca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 agactcctatctgagacaggagaatcactgtctacctctctttcctccccgcctggtcca 236
Query: 244 cttttgtctttaaggtactgtcagttagataacagtttctcaaaatgtaatcccaagacc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 cttttgtctttaaggtactgtcagttagataacagtttctcaaaatgtaatcccaagacc 176
Query: 304 aagagtccagacattgggaaccagttagaactacaaatctccatcttgcctcagcccttt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 aagagtccagacattgggaaccagttagaactacaaatctccatcttgcctcagcccttt 116
Query: 364 agaaccagaagcaggaagggagggtcattcagatcactctgatggaagtgggggtttgag 423
||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 agagccagaagcaggaagagagggtcattcagatcactctgatggaagtgggggtttgag 56
Query: 424 gcccactggcttagatgagaacaaacaaactgaaaactaaaagcgcagttaagag 478
||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 55 gcccactggcttagatgagaacaaacaaactgaaaactaaaagtgcagttaagag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 921
Length adjustment: 10
Effective length of query: 511
Effective length of database: 911
Effective search space: 465521
Effective search space used: 465521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no412_e24.g1 MSMg01no412_e24.g1 CHROMAT_FILE:
MSMg01no412_e24.g1 PHD_FILE: MSMg01no412_e24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:38 2005
(476 letters)
>mm_chr17_69441483_69442359
Length = 877
Score = 907 bits (469), Expect = 0.0
Identities = 475/477 (99%), Gaps = 1/477 (0%)
Strand = Plus / Plus
Query: 1 ttagcaaggccttcttgcatctccaacccagaatccttagcaccttgccctgctaggaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttagcaaggccttcttgcatctccaacccagaatccttagcaccttgccctgctaggaga 260
Query: 61 aacagggaccatgctgtgtgatgtgctttctgctcactcttttcttccaaagctactagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacagggaccatgctgtgtgatgtgctttctgctcactcttttcttccaaagctactagg 320
Query: 121 attcagtcataggaaggcacatgagtcctatgaccttctttaatgcccccaaaaccataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attcagtcataggaaggcacatgagtcctatgaccttctttaatgcccccaaaaccataa 380
Query: 181 acaccagagcctcagtagatctttctgctttcaacccccaccatagggcttcagctccaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acaccagagcctcagtagatctttctgctttcaacccccaccatagggcttcagctccaa 440
Query: 241 cactgatgtccctggaacatacttaaggcaagggaaaaccacagcagtgtctgccccaca 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cactgaggtccctggaacatacttaaggcaagggaaaaccacagcagtgtctgccccaca 500
Query: 301 cgaaacccccccccccccc-gtctgtggggaagtgagacaaggacatggccaagtccagc 359
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cgaaacccccccccccccccgtctgtggggaagtgagacaaggacatggccaagtccagc 560
Query: 360 ttttatttctgtcacttgtgtcccttaggggacttctgggcctcgtttccatgaaaaact 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttttatttctgtcacttgtgtcccttaggggacttctgggcctcgtttccatgaaaaact 620
Query: 420 cagaatttatttttctcctttctcactcatggaagtgagatgtgggcagcaggggct 476
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cagaatttatttttctcctttctcactcatggaagtgagatgtgggcagcaggggct 677
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 877
Length adjustment: 10
Effective length of query: 466
Effective length of database: 867
Effective search space: 404022
Effective search space used: 404022
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
