NTACACATCTATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCCAAGCCTTATCACCCAGTTTCTGTTCTGCTTTTGTTGTT
GTTGTTTTTGGTTTGGGGCGGGTTTGTTTGTTTGTTTGTTTGTTTCTCAT
CCTGACCACCACGGGTTGTTATTCACCTTCAGTCAGAAACATTTGCATCG
CCACTTGTAAATGTAGTCATCCTTTTAATTTATGTAAGATATATTGGTAC
TCAATTCTTAATGAAATGACAAATTTTGGTTTTCTACTGTTCAGTGAGAA
CATTAGGTCACGTCTTTTGTGTAAAGAAAAATAAAACTGCTGCAGTAACT
GAAAAAAAAGGAAAACCAGCATATCTTTATTAATTTAATCTGTATGCTTA
ATATTTTGGTGGTATTTCAAGTACTGGGGTTGAACAGAAGGCATCACCAG
ACCAGTACTTAACTACTGAGCAGTTCCCCTGCTCCATGAGAAACTACTTT
TAAAGTCATATATCTTTTAAACTCAGAAATAAATGCCCATACCGTATTAA
CTTGAATATGACCGAATTCACTGTGGTTTCTTTCTCCCCGCTTGGAAAAA
TGGTAACCCGGTCACCTCCAAACTCCCATTACAAATTACTGCCCTAACAA
TAAATTGCTCAACACCATACTCCGCAATCCCTCCTTTCCTTTCGCCCCCC
AACCCCACCCATTACCTAAAAAATTCTCTTTACAAAAATCCTACATTCCT
TTT

NNNCCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAACAGAGGAATCTCAA
ATGGCTGAGAATCATCAAAAGAAGTGTTCGGATTGCCTAGTGATCAGAGA
AATGCAAATCAAAACAATCCTGAGATTTCACCAATCAGAATGACTAATAT
CAAAACCTCAGGTGACAATACATGTTGATAATGATGTGGAGAAAGAGGAA
CACTCCTCCATTGCTGGTGGGATAGCAAACTGGTACAACCACTCTGGGAA
TCATTTTGGAGGTTCCTCAGAAAATTGTATATTGATCTACCTGAAGACCC
AGCTATACCACTCTTGGGAATATACCCATGAGATGTCCTACCATGCCATA
GGGGCACTTGTTCCAATATATTCACAGCGGCCTTATTTGTGATAGCCAGA
AACTTCTAACAATCTATATGCCCCACAACAGAAAAATAAATGCAGAAAAT
GTGGTTCATTTACACAATGTAAAAGTACTCAGCTATTATGTACAAGGACA
TCCTGAGTTTGCAGGCAAATGGATTGAATTGAAGAAACTCAGACCCGAAA
GGACATGCCTGGTATGTACTCACTAATAGTTGTATATTACCTTATACCCA
TTAACTAACTTTACGATTCAACAAGGAGGAGGAGGCGGAGGCGGTTTCCC
TCTCTCCCCTTTCCCCCCTTTTTTCCCTTCCTCTTTTCCTTCC

Query= MSMg01no412_f24.b1 MSMg01no412_f24.b1 CHROMAT_FILE:
MSMg01no412_f24.b1 PHD_FILE: MSMg01no412_f24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:43 2005
         (454 letters)



>mm_chr17_92770154_92771013
          Length = 860

 Score =  648 bits (335), Expect = 0.0
 Identities = 425/461 (92%), Gaps = 13/461 (2%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattccaagccttatcacccagtttctgttctgcttttgttgttgttgtttttggttt 63
           ||||||||||||||||  |||||||||||||||| |||   ||||||||||||||| |||
Sbjct: 752 ggaattccaagccttaggacccagtttctgttctactt---ttgttgttgtttttgcttt 696

                                                                       
Query: 64  ggggcgggtttgtttg----tttgtttgtttgtttctcatcctgaccaccacgggttgtt 119
            |||| ||||||||||    ||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 tgggcaggtttgtttgtttatttgtttgtttgtttctcatcctgaccaccacgggttgtt 636

                                                                       
Query: 120 attcaccttcagtcagaaacatttgcatcgccacttgtaaatgtagtcatccttttaatt 179
           ||||||||| |||||| |||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 635 attcaccttgagtcaggaacatttgcatcaccacttgtaaatgtactcatccttttaatt 576

                                                                       
Query: 180 tatgtaagatatattggtactcaattcttaatgaaatgacaaatttt-ggttttctactg 238
           |||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 575 tatgtaaggtatattggtactcaattcttaaagaaatgacaaatttttggttttctactg 516

                                                                       
Query: 239 ttcagtgagaacattaggtcacgtcttttgtgtaaagaaaaataaaactgctgcagtaac 298
           |||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||
Sbjct: 515 ttcagtgagaacattaggtcacatcttttgtgtaaagaaagataaaagtgctgcagtaac 456

                                                                       
Query: 299 tgaaaaaaaa-----ggaaaaccagcatatctttattaatttaatctgtatgcttaatat 353
           ||||||||||     |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 455 tgaaaaaaaaaaaaaggaaaaccagcatatctttattaatttaatctatatgcttaatat 396

                                                                       
Query: 354 tttggtggtatttcaagtactggggttgaacagaaggcatcaccagaccagtacttaact 413
           || |||||||||||| |||||||||||||||||||||||||||||||| |||||||||| 
Sbjct: 395 ttcggtggtatttcaggtactggggttgaacagaaggcatcaccagacgagtacttaacc 336

                                                    
Query: 414 actgagcagttcccctgctccatgagaaactacttttaaag 454
           |||||||||||| |||||||| |||||||||| ||||||||
Sbjct: 335 actgagcagttctcctgctccttgagaaactatttttaaag 295


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 860
Length adjustment: 10
Effective length of query: 444
Effective length of database: 850
Effective search space:   377400
Effective search space used:   377400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)