Query= MSMg01no413_l13.b1 MSMg01no413_l13.b1 CHROMAT_FILE:
MSMg01no413_l13.b1 PHD_FILE: MSMg01no413_l13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:29 2005
(628 letters)
>mm_chr17_85474938_85475965
Length = 1028
Score = 1176 bits (608), Expect = 0.0
Identities = 623/628 (99%)
Strand = Plus / Plus
Query: 1 aacttttgatgctctatcaagctaaactgtgtttttgttgagtactgctaccctgagaat 60
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 201 aacttttgatgctctatcaagctaaactgtgtttttgttgagtactgctatcttgagaat 260
Query: 61 agacctacctttagggagcgcactgagtcgtcggccagaccaatcacgttaacataaagg 120
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 261 agacctacctttagggagcgcactgagtcgtcggccagaccaatcacattaacatagagg 320
Query: 121 agattgccgtgtttcaggaacagaacacagtggtccttaaacatgtccaagtctacaacc 180
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agattgctgtgtttcaggaacagaacacagtggtccttaaacatgtccaagtctacaacc 380
Query: 181 ttggtatttctcttcattgtgaaaaataaatcccaattcataatagcaggggcatcagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttggtatttctcttcattgtgaaaaataaatcccaattcataatagcaggggcatcagct 440
Query: 241 gccgtccgcatcagctgtgtgaagaaggttaggaagatgtaggtgacagaacacaaggct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gccgtccgcatcagctgtgtgaagaaggttaggaagatgtaggtgacagaacacaaggct 500
Query: 301 gcagagctcagagtgacatcactgaggagaccacatcaactgtccctattctgtgatgag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcagagctcagagtgacatcactgaggagaccacatcaactgtccctattctgtgatgag 560
Query: 361 ctgtacgagggacaaagtgtgaatgtcactgttttagcccaggttagcacactgggtggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgtacgagggacaaagtgtgaatgtcactgttttagcccaggttagcacactgggtggt 620
Query: 421 gagacagtgtggtgccatgcttagctgacagtcaaccaggggacaatggatgtactggta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gagacagtgtggtgccatgcttagctgacagtcaaccaggggacaatggatgtactggta 680
Query: 481 tgcctgcctgagactaatctaaatgccatctcacaatcaggatttcaagtgtgctcttct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgcctgcctgagactaatctaaatgccatctcacaatcaggatttcaagtgtgctcttct 740
Query: 541 aagcccaactaagtttggattttacaacatgaacagtacagaatgcttcattcactgata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aagcccaactaagtttggattttacaacatgaacagtacagaatgcttcattcactgata 800
Query: 601 ttttacgtacagttatagtaggaagaaa 628
||||||||||||||||||||||||||||
Sbjct: 801 ttttacgtacagttatagtaggaagaaa 828
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1028
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1018
Effective search space: 629124
Effective search space used: 629124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no413_l13.g1 MSMg01no413_l13.g1 CHROMAT_FILE:
MSMg01no413_l13.g1 PHD_FILE: MSMg01no413_l13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:29 2005
(247 letters)
>mm_chr17_85609531_85610173
Length = 643
Score = 327 bits (169), Expect = 4e-94
Identities = 189/197 (95%), Gaps = 4/197 (2%)
Strand = Plus / Minus
Query: 49 gagagagagagagagagagagagagagagattgaacattggtcattaaacttagcaccac 108
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 gagagagagagagagagagcgagagagagattgaacattggtcattaaacttagcaccac 412
Query: 109 aactgatcttaaggcatgaggtctcttaaaatgaaggagattttgcagatgccgtgcggt 168
|||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct: 411 aactgatcttaaggcatgaggtctcttaaaat---ggagattttgcagatgccgtgtggt 355
Query: 169 tacctgtatttttgctaccacaagcaacactgccttcaatacgccggcacaaacaaaagg 228
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 354 tacctgtatttttgctaccacaagcaacactgccttcaatacgccagcacaaacaaaagg 295
Query: 229 cgttgtgattatatatt 245
| ||||||||||||||
Sbjct: 294 c-atgtgattatatatt 279
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 72
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 643
Length adjustment: 9
Effective length of query: 238
Effective length of database: 634
Effective search space: 150892
Effective search space used: 150892
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
