Query= MSMg01no414_c13.b1 MSMg01no414_c13.b1 CHROMAT_FILE:
MSMg01no414_c13.b1 PHD_FILE: MSMg01no414_c13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:05 2005
(573 letters)
>mm_chr17_87868617_87869589
Length = 973
Score = 683 bits (353), Expect = 0.0
Identities = 375/389 (96%), Gaps = 12/389 (3%)
Strand = Plus / Minus
Query: 191 tcagttctcttaggttttatacccagcaatggagttgtcagagtgtggagatttatttat 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 973 tcagttctcttaggttttatacccagcaatggagttgtcagagtgtggagatttatttat 914
Query: 251 gtgttatttatggagg------atttgttagctgccttccatagtgactgtgctgggtta 304
|||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 913 gtgttatttatggagggacgcaa------agctgccttccatagtgactgtgctgggtta 860
Query: 305 actgtatcctacattttccatttacttctccgcttcattgagaacatttcttattgtcca 364
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 859 actgtatcctacattttccatttacttctctgcttcattgagaacatttcttattgtcca 800
Query: 365 ttttcctctgagtgtaggcctcccagcatgaccagtagatgcattttgaggtgcgcactt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 ttttcctctgagtgtaggcctcccagcatgaccagtagatgcattttgaggtgcgcactt 740
Query: 425 agcgtaaaacattcctgtctgtaaatgtctcactgcaccttaggaggtggctccctgtag 484
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 739 agcgtaaaacattcctgtctgtaaatgtcttactgcaccttaggaggtggctccctgtag 680
Query: 485 ctgtttatcacagtttgctctgacccagataatagctgactggactaaggccgcattttg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 ctgtttatcacagtttgctctgacccagataatagctgactggactaaggccgcattttg 620
Query: 545 gaatctatatttgagaaggatgataggta 573
|||||||||||||||||||||||||||||
Sbjct: 619 gaatctatatttgagaaggatgataggta 591
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 573
Length of database: 973
Length adjustment: 10
Effective length of query: 563
Effective length of database: 963
Effective search space: 542169
Effective search space used: 542169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no414_c13.g1 MSMg01no414_c13.g1 CHROMAT_FILE:
MSMg01no414_c13.g1 PHD_FILE: MSMg01no414_c13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:05 2005
(457 letters)
>mm_chr17_87680275_87681131
Length = 857
Score = 793 bits (410), Expect = 0.0
Identities = 448/468 (95%), Gaps = 15/468 (3%)
Strand = Plus / Plus
Query: 1 ctttttaatccccctgcctttagtttccaaatactatgacagcaggcctgcaccaccaca 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 192 ctttttaatccccctgcctttagtttccaaatactatgacagcaggcgtgcaccaccaca 251
Query: 61 tgcaacaaaccccacttgctacttgccttttatctcaccagatgttattaatgcagtcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tgcaacaaaccccacttgctacttgccttttatctcaccagatgttattaatgcagtcac 311
Query: 121 agctctgtgactttttcgtttgttctttttcctataggtttccactctctcttcctaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 agctctgtgactttttcgtttgttctttttcctataggtttccactctctcttcctaatg 371
Query: 181 ctggtcattagaagatgaggatcttggctctgctagcaaagagctgagacgcggtcaggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ctggtcattagaagatgaggatcttggctctgctagcaaagagctgagacgcggtcaggc 431
Query: 241 gcctggaggaactattttttttgtatctgaggcacgaactctgtgccctcccctgtgccc 300
|||||||||||| | || ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 432 gcctggaggaac-acttgctttgtatctgaggcacgaactctgtgccctccc--gtgccc 488
Query: 301 acactcaaactgatgatagagtcaaacagacaagag--a----------cagccagtcct 348
|||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 489 acactcaaactgatgatagagtcaaacagacaagagctaatgctctctgcagccagtcct 548
Query: 349 ccagtatttgcaaccgtggttgacaaaagaatgggaagaaaagatggggtttctttgttt 408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 ccagtatttgcaaccgtggttgacaaaagaatgggaagaaaagatggggtttctttgttt 608
Query: 409 ctgtcagtctacccttcccctttctgtcaatcctgctgttccctctgg 456
|| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 ctatcagtctacccttcccctttctgtcaatcctgctgttccctctgg 656
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 857
Length adjustment: 10
Effective length of query: 447
Effective length of database: 847
Effective search space: 378609
Effective search space used: 378609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
