Query= MSMg01no415_a16.b1 MSMg01no415_a16.b1 CHROMAT_FILE:
MSMg01no415_a16.b1 PHD_FILE: MSMg01no415_a16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:18 2005
(473 letters)
>mm_chr18_40467472_40468343
Length = 872
Score = 377 bits (195), Expect = e-109
Identities = 237/251 (94%), Gaps = 1/251 (0%)
Strand = Plus / Minus
Query: 5 gaattctctgaactcactgtcctttcaggtccacatttgctctggctctggcaactgact 64
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 454 gaattctctgaactcactgtcctttcaggtccacctttgctctggctctggcaactgact 395
Query: 65 gaaccaaacaattaggctcatacctagaactttggaaatggtaatggagttgataacaca 124
||||||||||| |||||||||||||||| ||| | |||||||||||||||||| ||||||
Sbjct: 394 gaaccaaacaa-taggctcatacctagatcttcgaaaatggtaatggagttgaaaacaca 336
Query: 125 ccctaacagaaagaggaatgctccactcactagtacactttcactagaagcctcaccctg 184
| |||||||||||||||| |||||||||||||| | |||||||||||||||||| |||||
Sbjct: 335 ctctaacagaaagaggaaggctccactcactagaagactttcactagaagcctcgccctg 276
Query: 185 tcagcagtttaggaatttgtaaagccaatctggacaatatttaaatggtttggaatttct 244
|||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 275 ccagcagtttaggaatttgtaaagccaatctggacaatatttacatgatttggaatttct 216
Query: 245 acttcatgttt 255
|||||||||||
Sbjct: 215 acttcatgttt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 473
Length of database: 872
Length adjustment: 10
Effective length of query: 463
Effective length of database: 862
Effective search space: 399106
Effective search space used: 399106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no415_a16.g1 MSMg01no415_a16.g1 CHROMAT_FILE:
MSMg01no415_a16.g1 PHD_FILE: MSMg01no415_a16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:18 2005
(109 letters)
>mm_chr17_39984634_39985142
Length = 509
Score = 211 bits (109), Expect = 1e-59
Identities = 109/109 (100%)
Strand = Plus / Minus
Query: 1 ctcgttcatggggaataattgcaatccccgatccccatcacgaatggggttcaacgggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 ctcgttcatggggaataattgcaatccccgatccccatcacgaatggggttcaacgggtt 250
Query: 61 acccgcgcctgccggcgtagggtaggcacacgctgagccagtcagtgta 109
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 acccgcgcctgccggcgtagggtaggcacacgctgagccagtcagtgta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 109
Length of database: 509
Length adjustment: 8
Effective length of query: 101
Effective length of database: 501
Effective search space: 50601
Effective search space used: 50601
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
|
