ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTTTCGGAATTACCAAAAAGAGGAATGACTGGGTCCTATGGAAGTTGTA
CCTTTCTTTTATTTTCTCTCTTTCTCTCTCTCTTTCTTCTTCCTCCCTTT
CTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCATTCGTTCTCTCTTTCTTT
CCTTCTTTCCTTCCTTTATCCATCCTTTCTTCCTTTATCCATCCTTCCTT
CCTTTCTTCCTTTCTTCCTTTCTTCCTTCCTTCCTCCCTCCCTCCTTTCC
TCCCTCCCTTCCTTCCTTCTCCTTTTTTCTAGGAACCTCCAAACTGGTTT
CCACAATGGCTGTGTTAAGGTGCAGCACCCCCAGCAATGGGTCTTCTTTC
CCTACAACCTCTCCAACATTTCCAAATTCAGATTTGTTGGTGATGACCAT
TTTGACTGGGGTCATTCATTCATTCATTCCTTTGTTGACTGGAGGTTTTA
TTGCCTTGGCATTTAATTTCTGCAGTGGTAAATCCTGGACATTGGTCTTC
TGTCTCAAGTGTAGCTGGTAGAGCTCTTCTCACTGCCTGTGCCCTGCTGA
TGTTTCCTTTGGTGTGCATAAAATTCTTAACTCTGTGGAGTACAATATCC
TCATGGCTGTGGGTGGGTCTTGGACCAACGAAGAATTAATGCAAAAGAGC
CGGGCACCCACAATGGTTGGGAAAAGTGTCCCCCGGGGAGTTCTCCCACA
CTTTTCCCGGGTTCAGGGGTTCCATAAAAAAAGATTTAA

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTGGGGAAGGTTTGGGGAAGAATAAAGCAC
AAAGGAGCAACACATAAAAGCAGGTAAACTCTGACCTGATCTGAGAGACT
TAGCTGAAGCTGCCTGGGCTGGGGTTGTAGCTCGGAGCTCAAAAAAGAAA
AGAAGAAAGAGAAAAAGAAAAAGAAAAAGAAAAAGAAAAAGAAAAAGAAA
AAGAAAAAGGAAGGACGACTTAGCTGTCAAGAGAAGCCATGAACACTACA
TTGAACTTTTGATACTTTCTTTTGAAAGAAAAATGAAGCAAATGGCTTTG
ATTATAGCAGAAGTCTCATGTAATGTATTTGTAAAATGTTTGTTTTTGAG
ATTTTAAACTGCAGATTATTTGAAAGGAAGATTTTATAGTACTTCAATAA
TTTCAAAGCGCAAGAGACTGGCTTTTCTGTATAGGTTAGTGCACTGCATT
TTAATGTCACTTGGATAACCTTCTGTTCTTTTAAAAATAATATTTTCCAA
AGCCACACTCTGAGAATCTCAGCATCTTATCTGTTGTACGTTCTTCTAGG
AAATAAAAGTGGCTTGGCTGTAAAAAACTAAGCCGAAAATTTCTTAACTC
TCCCTCCCCGCTACTGTTTGAAGCAGTTAGCGAAAATTTCTATACCCCCC
CTCTTTCCCCCCTTTTTTATTCCGGCCCCCAAAAAGTTAACCTCCCGCTC
TTTTTCCCCGGCCCCTATTCTGTGAGAAAAATTTTCACTCTTCTAGGGTT
CGGC

Query= MSMg01no417_d23.g1 MSMg01no417_d23.g1 CHROMAT_FILE:
MSMg01no417_d23.g1 PHD_FILE: MSMg01no417_d23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:36:05 2005
         (458 letters)



>mm_chr17_10627869_10628726
          Length = 858

 Score =  814 bits (421), Expect = 0.0
 Identities = 456/485 (94%), Gaps = 27/485 (5%)
 Strand = Plus / Plus

                                                                       
Query: 1   tggggaaggtttggggaagaataaagcacaaaggagcaacacataaaagcaggtaaactc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 tggggaaggtttggggaagaataaagcacaaaggagcaacacataaaagcaggtaaactc 233

                                                                       
Query: 61  tgacctgatctgagagacttagctgaagctgcctgggctggggttgtagctcggagctca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 tgacctgatctgagagacttagctgaagctgcctgggctggggttgtagctcggagctca 293

                                                                       
Query: 121 aaaaagaaaagaagaaagagaaaaagaaaaagaaaaagaaaaagaa-------------- 166
           ||||||||||||||||||||||||||||||||||||||||||||||              
Sbjct: 294 aaaaagaaaagaagaaagagaaaaagaaaaagaaaaagaaaaagaagaaaaagaaaaaga 353

                                                                       
Query: 167 -------------aaagaaaaagaaaaagaaaaaggaaggacgacttagctgtcaagaga 213
                        |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 aaaagaaaaagaaaaagaaaaagaaaaagaaaaaggaaggacgacttagctgtcaagaga 413

                                                                       
Query: 214 agccatgaacactacattgaacttttgatactttcttttgaaagaaaaatgaagcaaatg 273
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 414 agccatgaacactacattgaacttttgatactttctttcgaaagaaaaatgaagcaaatg 473

                                                                       
Query: 274 gctttgattatagcagaagtctcatgtaatgtatttgtaaaatgtttgtttttgagattt 333
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 gctttgattatagcagaagtctcatgtaatgtatttgtaaaatgtttgtttttgagattt 533

                                                                       
Query: 334 taaactgcagattatttgaaaggaagattttatagtacttcaataatttcaaagcgcaag 393
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 taaactgcagattatttgaaaggaagattttatagtacttcaataatttcaaagcgcaag 593

                                                                       
Query: 394 agactggcttttctgtataggttagtgcactgcattttaatgtcacttggataaccttct 453
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 agactagcttttctgtataggttagtgcactgcattttaatgtcacttggataaccttct 653

                
Query: 454 gttct 458
           |||||
Sbjct: 654 gttct 658


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 51
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 858
Length adjustment: 10
Effective length of query: 448
Effective length of database: 848
Effective search space:   379904
Effective search space used:   379904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)