NGGGCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCACTCACTCTAGTAAGTTTGTAATGAACGTCTTACATGTAG
GAACATTTTAAATTAAAAGAGTTTAATATATCCTCTTCAATCTCTATGTT
TCTCATTTTATTTGTTCTTGCCCCTGGCTAGGAACTCACATATTAAAGTT
ACCTGAGCAAACACTGTTGTCCTTTCCCAGTCCTATGATCATTTACTCTT
GTGTAGGCATGCTGGCTATAAATGTTAATGGCGATACCTTATCAGTCTTG
ACTTCTTTTTATGAGTTGGTTAAAAAATATTGCTCATATTATTCTTTGGG
TAGTTGAGTCATCTGGGAGAAATGACCTCAAGTAACTTTTCACATTCTAA
GTATCTATTTTTATGTTTTCTGTGCAGTGTGTCCCTCCACATTATTTCTC
TATTTCTATTTAATTCTTCTCTTTGTATTATTATTTTTAAATGTTCCTTA
TATATTCTATATAAAACTTCTTTTTGAGAACAGTATTGATGAATATTTAT
CTCAATTGTTGTATTTCATTGCACGAATATATTTTGAAAATTATTTTTAT
ATTTGTCTAAATTGATGTGTTAATGAAACTTAGTGTTTTTCCTCCTATCA
AAACTACCTGGACATTTTAATTTAAAGGCATCACAATTTTTGATATAAAA
TTAATTAACTTTCATATGGTTAACCCATTGCATCACACTTAACAATATAC
GTA

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAAGGTCCTTTCCCACTTTCTCTTC
TAATAGATCCTGTGTATCTGGTTTTATAATTACGTCCTTGATCCACTTGA
GCTTGAGCTTTGTGAAAGGTTATAAATATGAATCTATTTTCATTCTTCTC
CATATGGACAGCGAGTTAGACCAGCACCATTTACTGAAGATGCTTTCATT
TTTCCATTGTATATTTTTGGCATCTTTGTTAAAGATCAAGTGTCCATAAG
TGTCTAGTTTCACTTCTGGGTCTTCACTTCTACGCCATTGTTCAACATGT
CTGCTTCTCTACCGATACCATGTTGTTTTTATTACTCTTTCTCTGTAGTA
AAGCTTGAGATCAGGGATGGTGACTCCCCCCAGCTGATCTCTTATTGTTA
AGAATTGGGTTTTTTTTTTTTTGCTTGTTTTGTTTTGTTTTTTTGGCTTT
TGAATTGGATTTGAGAATTGCTCTTTCCATGTCTTTGAAGAAATGTGTTG
GGATTTTGATTGGGATTTCATTGAATCTCTATATTGCCTTTGGNAGAATG
GCCATTTTACTATGTTAATTACATCTATACCTGAGCATGGGACACCTCTT
CCTTTTCTGAGATCTTCAATTTCCTTCTTGAGAGGCTTGAAGTATTGCCT
TATACGATTTTCCTTGGTTGGCTAGATACCCCCAACATTTATATT

Query= MSMg01no418_h03.b1 MSMg01no418_h03.b1 CHROMAT_FILE:
MSMg01no418_h03.b1 PHD_FILE: MSMg01no418_h03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:38 2005
         (613 letters)



>mm_chr17_77398387_77399399
          Length = 1013

 Score = 1141 bits (590), Expect = 0.0
 Identities = 605/610 (99%), Gaps = 1/610 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcactcactctagtaagtttgtaatgaacgtcttacatgtaggaacattttaaatt 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcactcactctagtaagtttgtaatgaacgtcttacatgtaggaacattttaaatt 264

                                                                       
Query: 65  aaaagagtttaatatatcctcttcaatctctatgtttctcattttatttgttcttgcccc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaaagagtttaatatatcctcttcaatctctatgtttctcattttatttgttcttgcccc 324

                                                                       
Query: 125 tggctaggaactcacatattaaagttacctgagcaaacactgttgtcctttcccagtcct 184
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tggctagggactcacatattaaagttacctgagcaaacactgttgtcctttcccagtcct 384

                                                                       
Query: 185 atgatcatttactcttgtgtaggcatgctggctataaatgttaatggcgataccttatca 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atgatcatttactcttgtgtaggcatgctggctataaatgttaatggcgataccttatca 444

                                                                       
Query: 245 gtcttgacttctttttatgagttggttaaaaaatattgctcatattattctttgggtagt 304
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 445 gtcttgacttctttttatgagttggtttaaaaatattgctcatattattctttgggtagt 504

                                                                       
Query: 305 tgagtcatctgggagaaatgacctcaagtaacttttcacattctaagtatctatttttat 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgagtcatctgggagaaatgacctcaagtaacttttcacattctaagtatctatttttat 564

                                                                       
Query: 365 gttttctgtgcagtgtgtccctccacattatttctctatttctatttaattcttctcttt 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gttttctgtgcagtgtgtccctccacattatttctctatttctatttaattcttctcttt 624

                                                                       
Query: 425 gtattattatttttaaatgttccttatatattctatataaaacttctttttgagaacagt 484
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 625 gtattattatttttaaatgttccttatatattctatataaaacctctttttgagaacagt 684

                                                                       
Query: 485 attgatgaatatttatctcaattgttgtatttcattgcacgaa-tatattttgaaaatta 543
           |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 685 attgatgaatatttatctcaattgttgtatttcattgcacaaactatattttgaaaatta 744

                                                                       
Query: 544 tttttatatttgtctaaattgatgtgttaatgaaacttagtgtttttcctcctatcaaaa 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tttttatatttgtctaaattgatgtgttaatgaaacttagtgtttttcctcctatcaaaa 804

                     
Query: 604 ctacctggac 613
           ||||||||||
Sbjct: 805 ctacctggac 814


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 613
Length of database: 1013
Length adjustment: 10
Effective length of query: 603
Effective length of database: 1003
Effective search space:   604809
Effective search space used:   604809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)