Query= MSMg01no418_l16.b1 MSMg01no418_l16.b1 CHROMAT_FILE:
MSMg01no418_l16.b1 PHD_FILE: MSMg01no418_l16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:38:00 2005
(595 letters)
>mm_chr17_45135424_45136421
Length = 998
Score = 1118 bits (578), Expect = 0.0
Identities = 586/590 (99%), Gaps = 3/590 (0%)
Strand = Plus / Plus
Query: 9 gaattcttcagcattacttttattggattctggcttcagcttgtatcttttgtcaaaaga 68
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 gaattcttcagcattaattttattggattctggcttcagcttgtatcttttgtcaaaaga 268
Query: 69 gttagctgctatattaagatctatgtccagaatctaccctgaaatgatgatatattactt 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 gttagctgctatattaagatctatgtccagaatctaccctgaaatgatgatatattactt 328
Query: 129 tcttagcaatcccttgtttaaagctgcacaatttaggcaaagatggacttaaattttact 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tcttagcaatcccttgtttaaagctgcacaatttaggcaaagatggacttaaattttact 388
Query: 189 cctatcttccttaaggaaaaaaa---catcatataagttagcaggcacatgattatgaaa 245
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 389 cctatcttccttaaggaaaaaaaaaacatcatataagttagcaggcacatgattatgaaa 448
Query: 246 aagttttctatgattattttattataagcatatttttattctaaagctttattaacatat 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 aagttttctatgattattttattataagcatatttttattctaaagctttattaacatat 508
Query: 306 ttatagtaagcagcagatcatcatataatgcttgagtcatctttatttggtataaccatc 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 ttatagtaagcagcagatcatcatataatgcttgagtcatctttatttggtataaccatc 568
Query: 366 attattctaatgaaaagtattttagtttttcctcactccctaagtctcactgatatcctg 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 attattctaatgaaaagtattttagtttttcctcactccctaagtctcactgatatcctg 628
Query: 426 ttcattaatccatattaaccactaactgtaacatttaataactcctttatgatcccttgc 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 ttcattaatccatattaaccactaactgtaacatttaataactcctttatgatcccttgc 688
Query: 486 agtaaccttctgagttatggtttgcttaggggtgtagctctgttgtagagctcatgttac 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 agtaaccttctgagttatggtttgcttaggggtgtagctctgttgtagagctcatgttac 748
Query: 546 cctgccagggtcttacttcaatacaactaaacaaatatattaatacatat 595
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 cctgccagggtcttacttcaatacaactaaacaaatatattaatacatat 798
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 998
Length adjustment: 10
Effective length of query: 585
Effective length of database: 988
Effective search space: 577980
Effective search space used: 577980
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no418_l16.g1 MSMg01no418_l16.g1 CHROMAT_FILE:
MSMg01no418_l16.g1 PHD_FILE: MSMg01no418_l16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:38:00 2005
(434 letters)
>mm_chr17_45306265_45307097
Length = 833
Score = 781 bits (404), Expect = 0.0
Identities = 422/428 (98%), Gaps = 1/428 (0%)
Strand = Plus / Minus
Query: 7 tgggtaatccacaaaccagagggctctgaggtgagaggcagcacccaacagagaagagct 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 tgggtaatccacaaaccagagggctctgaggtgagaggcagcacccaacagagaagagct 544
Query: 67 ccgcacagtgctgttggaggattgacagcacagaaggtgcctgctcactctcctctcccc 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 ccgcacagtgctgttggaggattgacagcacagaaggtgcctgctcactctcctctcccc 484
Query: 127 gactctgcccttctcagggctgccctgtcgtatatggacctcatccaggtagagtgaaat 186
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 483 gactctgcccttctcagggctgccctgtcgcatatggacctcatccaggtagagtgaaat 424
Query: 187 cttgcatccctctggctgtagaagttactgtgcggggtaatgaaatctttgttgttgcat 246
|||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 423 cttgcatccctctggctgtagaagttgctgtgctaggtaatgaaatctttgttgttgcag 364
Query: 247 attccaaaagaaagaaggcgagaaagaagctagcccttcaagtgtgctttaagagcagcg 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 attccaaaagaaagaaggcgagaaagaagctagcccttcaagtgtgctttaagagcagcg 304
Query: 307 agctgatggggaatgcatttcccacagcagaacaggatgagggggatttgtaagtgaggc 366
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 303 agctgatggggaatgcatttcccacagcagaacaggatga-ggggatttgtaagtgaggc 245
Query: 367 tccagcagctggtctctgggggcagggtggcagctgccgtgtgtgtgtgtgtgtgtgtgt 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 tccagcagctggtctctgggggcagggtggcagctgccgtgtgtgtgtgtgtgtgtgtgt 185
Query: 427 gtgtgtgt 434
||||||||
Sbjct: 184 gtgtgtgt 177
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 54
Number of extensions: 20
Number of successful extensions: 19
Number of sequences better than 10.0: 1
Number of HSP's gapped: 17
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 833
Length adjustment: 9
Effective length of query: 425
Effective length of database: 824
Effective search space: 350200
Effective search space used: 350200
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
