Query= MSMg01no419_h06.b1 MSMg01no419_h06.b1 CHROMAT_FILE:
MSMg01no419_h06.b1 PHD_FILE: MSMg01no419_h06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:39:00 2005
(244 letters)
>mm_chr17_44634832_44635475
Length = 644
Score = 449 bits (232), Expect = e-131
Identities = 241/244 (98%)
Strand = Plus / Minus
Query: 1 tgattcttaaccacacaaactaggttgctgagcatctggggcccatgaacaatggatgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgattcttaaccacacaaactaggttgctgagcatctggggcccatgaacaatggatgga 385
Query: 61 ccttgatggatgctgatgtcaggacagatgagggatacagccttcaccatatttctgaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ccttgatggatgctgatgtcaggacagatgagggatacagccttcaccatatttctgaaa 325
Query: 121 aggacttctcggagggccaacccactgtcagacagagcagtctcttaggcagaaaggaga 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 324 aggacttctcggagggccaacccactgtcagacagagcagtctcttagggagaaaggaga 265
Query: 181 tcttcctgtgtagtagtgatacaagctgtcttggtcactctcacaaaacgaccacagagg 240
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 264 tcttcctgtgtagtagtgatacaagctgtcttggtcactctcactaaacgaccacatagg 205
Query: 241 gact 244
||||
Sbjct: 204 gact 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no419_h06.g1 MSMg01no419_h06.g1 CHROMAT_FILE:
MSMg01no419_h06.g1 PHD_FILE: MSMg01no419_h06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:39:00 2005
(454 letters)
>mm_chr17_44522298_44523151
Length = 854
Score = 770 bits (398), Expect = 0.0
Identities = 432/444 (97%), Gaps = 5/444 (1%)
Strand = Plus / Plus
Query: 1 aagtcaaaactacagaaacagaaagtttgagccaaagtgtgacaggatgctttccccatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagtcaaaactacagaaacagaaagtttgagccaaagtgtgacaggatgctttccccatc 260
Query: 61 agtaccagccatctttctctcctaggttaaaatgcttaggctaggcaaggttgctggcct 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtaccagctatctttctctcctaggttaaaatgcttaggctaggcaaggttgctggcct 320
Query: 121 gcttatatttgagacaagctggaccagaaattaggacacattcaggaaggataaccttat 180
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggttatatttgagacaagctggaccagaaattaggacacattcaggaaggataaccttat 380
Query: 181 ctccaaagagttccttcattctgtggaataccttgactttcttgtcatctaaatggtggc 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctccgaagagttccttcattctgtggaataccttgactttcttgtcatctaaatggtggc 440
Query: 241 ttgtcgcctcactcaagggtgcttgctatgctgacaaactgctcctctacctgaggatac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgtcgcctcactcaagggtgcttgctatgctgacaaactgctcctctacctgaggatac 500
Query: 301 tcaagatatctggaatggctctccttaattttgacactcactgaaatccctgatatatat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcaagatatctggaatggctctccttaattttgacactcactgaaatccctgatatatat 560
Query: 361 atatatctcacatatacatat-acatatacatatacatatacatat-acatatacatata 418
|||||| | | ||||| |||| ||||||||||||||||||| ||| |||||||||||||
Sbjct: 561 atatatat-atatatatatatcacatatacatatacatata--tatcacatatacatata 617
Query: 419 catatacatatacatatacatata 442
|||||||||||||||||| |||||
Sbjct: 618 catatacatatacatatatatata 641
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 55
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 854
Length adjustment: 10
Effective length of query: 444
Effective length of database: 844
Effective search space: 374736
Effective search space used: 374736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
