Query= MSMg01no422_m01.b1 MSMg01no422_m01.b1 CHROMAT_FILE:
MSMg01no422_m01.b1 PHD_FILE: MSMg01no422_m01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:16 2005
(220 letters)
>mm_chr17_85406468_85407086
Length = 619
Score = 379 bits (196), Expect = e-110
Identities = 214/220 (97%), Gaps = 1/220 (0%)
Strand = Plus / Plus
Query: 1 ttttcctgtgatcaagagtctgaaaatgattgctttctctacatttcttttctagcctgt 60
||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 201 ttttcctgtgatcaagagtctgaaaatgattgctttctctaaatttcttttctaacctgt 260
Query: 61 accacaggtgactggatttttaaagatggtacataaccatgcatggtagctacttcagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 accacaggtgactggatttttaaagatggtacataaccatgcatggtagctacttcagtg 320
Query: 121 tgaatgaataggaccttgagttgaagggtagattaataagctgtaacacttgccttaact 180
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
Sbjct: 321 tgaatgaataggaccttgagttgaagggtaaattaataagctgtaacacttgccttaagt 380
Query: 181 catattccatatggctacctaagtgttaggattatgtaat 220
|| ||||||||||||||||||||| |||||||||||||||
Sbjct: 381 cagattccatatggctacctaagt-ttaggattatgtaat 419
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 220
Length of database: 619
Length adjustment: 9
Effective length of query: 211
Effective length of database: 610
Effective search space: 128710
Effective search space used: 128710
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no422_m01.g1 MSMg01no422_m01.g1 CHROMAT_FILE:
MSMg01no422_m01.g1 PHD_FILE: MSMg01no422_m01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:16 2005
(130 letters)
>mm_chr17_85592824_85593353
Length = 530
Score = 228 bits (118), Expect = 8e-65
Identities = 127/130 (97%)
Strand = Plus / Minus
Query: 1 ataagtaagcaatgcatctcgattttgctttgtctccccgtaagtagtctgacctgctca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 330 ataagtaagcaatgcatctcgattttgctttgtctccccgtaagtagtctgacctgccca 271
Query: 61 cagtgcccactccatgggacatgaggacaggagccgtgtgagcccaggagtctgagccta 120
|||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 270 cagtgcccactccatgggacatgaagacaggagccgtgtgagcccgggagtctgagccta 211
Query: 121 gtgcagacat 130
||||||||||
Sbjct: 210 gtgcagacat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 130
Length of database: 530
Length adjustment: 8
Effective length of query: 122
Effective length of database: 522
Effective search space: 63684
Effective search space used: 63684
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
