Query= MSMg01no424_a22.b1 MSMg01no424_a22.b1 CHROMAT_FILE:
MSMg01no424_a22.b1 PHD_FILE: MSMg01no424_a22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:44:54 2005
(272 letters)
>mm_chr17_88729885_88730556
Length = 672
Score = 518 bits (268), Expect = e-151
Identities = 268/268 (100%)
Strand = Plus / Minus
Query: 5 gaattcctgtcctgatttacttcaataatgaactctgatgtggaagtgtaaacgacataa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gaattcctgtcctgatttacttcaataatgaactctgatgtggaagtgtaaacgacataa 542
Query: 65 accctttcttcccccaagttgctttggttatggtgtttcattactgcaacagaaacccta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 accctttcttcccccaagttgctttggttatggtgtttcattactgcaacagaaacccta 482
Query: 125 cctaagacatactagaaaaacagaaaattcacataattagctcagtgttggaagaacgtt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cctaagacatactagaaaaacagaaaattcacataattagctcagtgttggaagaacgtt 422
Query: 185 atttcaggcaacctgaatccatgtccccgggctgtgtcaccgtatttggttggagaacaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atttcaggcaacctgaatccatgtccccgggctgtgtcaccgtatttggttggagaacaa 362
Query: 245 gctctcccttgttccctttgatgtagag 272
||||||||||||||||||||||||||||
Sbjct: 361 gctctcccttgttccctttgatgtagag 334
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 272
Length of database: 672
Length adjustment: 9
Effective length of query: 263
Effective length of database: 663
Effective search space: 174369
Effective search space used: 174369
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no424_a22.g1 MSMg01no424_a22.g1 CHROMAT_FILE:
MSMg01no424_a22.g1 PHD_FILE: MSMg01no424_a22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:44:54 2005
(243 letters)
>mm_chr17_88573701_88574343
Length = 643
Score = 433 bits (224), Expect = e-126
Identities = 239/244 (97%), Gaps = 2/244 (0%)
Strand = Plus / Plus
Query: 1 ttcagctctcctagttcctggagccctgaagctgcgagactccaaagccttgtgccagtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcagctctcctagttcctggagccctgaagctgcgagactccaaagccttgtgccagtc 260
Query: 61 acagacgacccactttaagagctttctgaggcagcctcctgggcttggcaaacactgtga 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acagacgatccactttaagagctttctgaggcagcctcctgggcttggcaaacactgtga 320
Query: 121 cttggtgtgatcttggcagggtggagcactactttcattctgcccttagaaatttggtta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttggtgtgatcttggcagggtggagcactactttcattctgcccttagaaatttggtta 380
Query: 181 gcaagaggttggggaggcacttgggg-tctggacgaccggctgattgaggagagaggtcg 239
||||| |||||||| ||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 381 gcaaggggttgggggggcacttggggat-tggacgaccggctgattgaggagagaggtcg 439
Query: 240 gtga 243
||||
Sbjct: 440 gtga 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
