NGGATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTATGGCATTTTCTGAAGGCTGACAATGGTTTCTTATTACAT
TTCTATTGAATTTGTGTATTGTATTAGCTAGAATAACCATCTGCATAAAA
ATAATTTTTCTATTACATGAAAATGAGAAGTATCTGCATCATGTTCTACT
TTCTCGAAATTCCTTCTTCGGTATCTTAGGTTTTCCCTATAGTTTACTTT
CATTTACTTCATTAGGTTCATTTTCAGTTATTTTGGGGGCTATATGGAAT
GAGATTGATTTCCTGATTATTTGCCTATTTTGTACAGGACATCTTCTGAT
TCAGGGCAGGGGTGTAGTTTCTTATTCCACCAACTTGGTGAAAATATTTA
TCTGCTTTAAGAGCCTCATGTAAAGTCTTTATGGTCTCTTTTCTAGAGAG
TAATGTGTGCAGGTGGACATCATCTGAATTCTCTTCATATTTGTTTCCCT
TTTAGTTTTTTGCTTACAGTTCTAAAACTTCAATACAATTAACCATAGCA
TAGATAATGGATACCCTTGTATTGTTTCTGATCACATTAAAACACTTAAC
TCCATCAAGAGTTTATATGTAAAGAAAAATGAAGATGAATCTTACTGTGT
ACATAAACGCAACTGATTAATGAAAACTTTTTGTTTAAAGTTGACATATT
ACCTAAAATAAATATATTCAATGAAGATTAAGATGATATGTACATA

NCCACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAGCCCTGATCTACATAGT
GAGTTCCCAGTCAGCAAGGGCTAAATAGTAAAACCCTATATAGACAAATA
AACAGGAACAAAAAAATATTGATCTCTTCAACGTGTTTGTTTACCATTTT
ATTGTGGCTCATAATGTTGTCTTATGTAGAATACTCTGCCATCCCCATAT
CTAAGTTGTCTGTTGGTTCAGTTTTCATCTTGTGACTGAACACAATGTAA
TTTAAAAAGAGGATTTTTTTTTATTTTGGTTTACAATTTCCAAGATTGGA
GAAAAAGGTTGCTTGGCTCTGTTACTGTGGCCTGTTGTGAGGCCAAGCAC
CATGGGAGAAGGACATGGAAAGTGAGAACTCTTATCTCATAACAGTCAGA
AAGCAGAAAGAGCTCAGAGGCAGAACACAATATGACCACAATAATGATAT
GGCCTCAGTGACATACTTTCTCCAGTTAGACCGTTCTCCAAAAGTTTCCC
AGGCCTTCCCCAATAGATTCACCAGCTGAGGACCAAGCCTTCAAACCTTA
AAACAGATTTTACAATTTTATTACTCAGNTAACTGTTTTTCCATTTATAA
GTCATGGGGTCCGTGATAAGAAGGGTCAGTGGTTAAGAGCATTTGCCACC
ATAGCACGGGAACAAATTTGACTCCCACGTCCATGTAAGAAGGTGCAAC

Query= MSMg01no427_c04.b1 MSMg01no427_c04.b1 CHROMAT_FILE:
MSMg01no427_c04.b1 PHD_FILE: MSMg01no427_c04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:55 2005
         (582 letters)



>mm_chr17_40876785_40877766
          Length = 982

 Score = 1025 bits (530), Expect = 0.0
 Identities = 569/582 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   aggctgacaatggtttcttattacatttctattgaatttgtgtattgtattagctagaat 60
           |||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 201 aggctgacaatggtttgttatttcatttctattgaatttgtgtattgcattagctagaat 260

                                                                       
Query: 61  aaccatctgcataaaaataatttttctattacatgaaaatgagaagtatctgcatcatgt 120
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 261 aaccatctgcataaaaataatttttctattacatgagaatgagaagtatctgcatcatgt 320

                                                                       
Query: 121 tctactttctcgaaattccttcttcggtatcttaggttttccctatagtttactttcatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctactttctcgaaattccttcttcggtatcttaggttttccctatagtttactttcatt 380

                                                                       
Query: 181 tacttcattaggttcattttcagttattttgggggctatatggaatgagattgatttcct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tacttcattaggttcattttcagttattttgggggctatatggaatgagattgatttcct 440

                                                                       
Query: 241 gattatttgcctattttgtacaggacatcttctgattcagggcaggggtgtagtttctta 300
           |||||||||||||   |||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gattatttgcctaaagtgtataggacatcttctgattcagggcaggggtgtagtttctta 500

                                                                       
Query: 301 ttccaccaacttggtgaaaatatttatctgctttaagagcctcatgtaaagtctttatgg 360
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 501 ttccaccaacttggtgaaaatatttatctgctttaagagcctcatgtagagtctttatgg 560

                                                                       
Query: 361 tctcttttctagagagtaatgtgtgcaggtggacatcatctgaattctcttcatatttgt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tctcttttctagagagtaatgtgtgcaggtggacatcatctgaattctcttcatatttgt 620

                                                                       
Query: 421 ttcccttttagttttttgcttacagttctaaaacttcaatacaattaaccatagcataga 480
           |||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 621 ttcccttttagtgttttgcttacagttctaaaacttcaatacaattaaccgtagcgtaga 680

                                                                       
Query: 481 taatggatacccttgtattgtttctgatcacattaaaacacttaactccatcaagagttt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 taatggatacccttgtattgtttctgatcacattaaaacacttaactccatcaagagttt 740

                                                     
Query: 541 atatgtaaagaaaaatgaagatgaatcttactgtgtacataa 582
           ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 741 atatgtaaagaaaaatgaaaatgaatcttactgtgtacataa 782


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 582
Length of database: 982
Length adjustment: 10
Effective length of query: 572
Effective length of database: 972
Effective search space:   555984
Effective search space used:   555984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no427_c04.g1 MSMg01no427_c04.g1 CHROMAT_FILE:
MSMg01no427_c04.g1 PHD_FILE: MSMg01no427_c04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:55 2005
         (547 letters)



>mm_chr17_41025022_41025968
          Length = 947

 Score = 1019 bits (527), Expect = 0.0
 Identities = 542/547 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   aaagccctgatctacatagtgagttcccagtcagcaagggctaaatagtaaaaccctata 60
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 aaagccctgatctacacagtgagttcccagtcagcaagggctaaatagtaaaaccctata 576

                                                                       
Query: 61  tagacaaataaacaggaacaaaaaaatattgatctcttcaacgtgtttgtttaccatttt 120
           |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 575 tagacaaataaacaggaacaaaaaaatattgatctctttaatgtgtttgtttaccatttt 516

                                                                       
Query: 121 attgtggctcataatgttgtcttatgtagaatactctgccatccccatatctaagttgtc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 attgtggctcataatgttgtcttatgtagaatactctgccatccccatatctaagttgtc 456

                                                                       
Query: 181 tgttggttcagttttcatcttgtgactgaacacaatgtaatttaaaaagaggattttttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 tgttggttcagttttcatcttgtgactgaacacaatgtaatttaaaaagaggattttttt 396

                                                                       
Query: 241 ttattttggtttacaatttccaagattggagaaaaaggttgcttggctctgttactgtgg 300
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 395 ttattttggtttacaatttccaaggttggagaaaaaggttgcttggctctgttactgtgg 336

                                                                       
Query: 301 cctgttgtgaggccaagcaccatgggagaaggacatggaaagtgagaactcttatctcat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 cctgttgtgaggccaagcaccatgggagaaggacatggaaagtgagaactcttatctcat 276

                                                                       
Query: 361 aacagtcagaaagcagaaagagctcagaggcagaacacaatatgaccacaataatgatat 420
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 agcagtcagaaagcagaaagagctcagaggcagaacacaatatgaccacaataatgatat 216

                                                                       
Query: 421 ggcctcagtgacatactttctccagttagaccgttctccaaaagtttcccaggccttccc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 ggcctcagtgacatactttctccagttagaccgttctccaaaagtttcccaggccttccc 156

                                                                       
Query: 481 caatagattcaccagctgaggaccaagccttcaaaccttaaaacagattttacaatttta 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 caatagattcaccagctgaggaccaagccttcaaaccttaaaacagattttacaatttta 96

                  
Query: 541 ttactca 547
           |||||||
Sbjct: 95  ttactca 89


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 947
Length adjustment: 10
Effective length of query: 537
Effective length of database: 937
Effective search space:   503169
Effective search space used:   503169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)