Query= MSMg01no427_c17.b1 MSMg01no427_c17.b1 CHROMAT_FILE:
MSMg01no427_c17.b1 PHD_FILE: MSMg01no427_c17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:58 2005
(529 letters)
>mm_chr17_31763792_31764720
Length = 929
Score = 984 bits (509), Expect = 0.0
Identities = 524/529 (99%)
Strand = Plus / Plus
Query: 1 tacagtgaaaccttgtttcaaaatacaaaacaaagctgggcagtggtagtacatgccttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tacagtgaaaccttgtttcaaaatacaaaacaaagctgggcagtggtagtacatgccttt 260
Query: 61 aatgacagcactcatgtggcagaggcaggtaaatctcggagttggaggccagcctggtct 120
|||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 261 aatgacagcactcacgtggcagaggcaggtaaatctcagagttggaggccagcctggtct 320
Query: 121 acagagtgagatctgggacagtcagggctacccagagaatctctgtctcaaaaaacaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acagagtgagatctgggacagtcagggctacccagagaatctctgtctcaaaaaacaaaa 380
Query: 181 acaacccaaacaaaatgaaaacaaacaaaaaagatgcttgctctgatagctccacttcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acaacccaaacaaaatgaaaacaaacaaaaaagatgcttgctctgatagctccacttcac 440
Query: 241 ttctgccttctttctctttctgcaggaccttcccaggctggctcttgaaaaggggccatc 300
|||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttctgccttcatcctctttctgcaggaccttcccaggctggctcttgaaaaggggccatc 500
Query: 301 tcagtcactaacacacatccttcatcccagaagacccccgctgccagtatccccccagag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcagtcactaacacacatccttcatcccagaagacccccgctgccagtatccccccagag 560
Query: 361 cctcagcacggggtcatcccagggcccttgtccaggatggaggcagtcccaggagaacca 420
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cctcagcacggggtcattccagggcccttgtccaggatggaggcagtcccaggagaacca 620
Query: 421 aatactcacagagctcacacttgagaccggcattctttgagatcttgttgattctgacca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aatactcacagagctcacacttgagaccggcattctttgagatcttgttgattctgacca 680
Query: 481 taggggtgttcccaattttcctcagaatatctggtaaaattttggggga 529
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 taggggtgttcccaattttcctcagaatatctggtaaaattttggggga 729
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 529
Length of database: 929
Length adjustment: 10
Effective length of query: 519
Effective length of database: 919
Effective search space: 476961
Effective search space used: 476961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no427_c17.g1 MSMg01no427_c17.g1 CHROMAT_FILE:
MSMg01no427_c17.g1 PHD_FILE: MSMg01no427_c17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:58 2005
(579 letters)
>mm_chr17_31953020_31953998
Length = 979
Score = 948 bits (490), Expect = 0.0
Identities = 496/498 (99%), Gaps = 1/498 (0%)
Strand = Plus / Minus
Query: 83 aaggctgccatgctgagctggctggaccatcatgcagagatgttttctggaagctgtgtc 142
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 979 aaggctgccatgctgagctggctgggccatcatgcagagatgttttctggaagctgtgtc 920
Query: 143 ctcttggag-aaaaaaccaagcctcttagagcctcttatcaaagaaattgtgagatcccc 201
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 919 ctcttggagaaaaaaaccaagcctcttagagcctcttatcaaagaaattgtgagatcccc 860
Query: 202 tggatccagctgggcctgagacaatagtgtatctggacctctaattacttgaccctttct 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859 tggatccagctgggcctgagacaatagtgtatctggacctctaattacttgaccctttct 800
Query: 262 tgctaaaaccagtttgtgttctttggggatgcaagatacccatgctgagctgcggcctgc 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 tgctaaaaccagtttgtgttctttggggatgcaagatacccatgctgagctgcggcctgc 740
Query: 322 cacttccaatccagggaggcctgcaggatatgacccctttaaatacactttccccaaact 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 cacttccaatccagggaggcctgcaggatatgacccctttaaatacactttccccaaact 680
Query: 382 tgtgcctcttcagggcagtaggggagcccattgtattgtgggactttgtgtcctctgagg 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 tgtgcctcttcagggcagtaggggagcccattgtattgtgggactttgtgtcctctgagg 620
Query: 442 ccatggtgtgaagatttggcttgctggcacttacgaaagagagacagggagtgttcagac 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ccatggtgtgaagatttggcttgctggcacttacgaaagagagacagggagtgttcagac 560
Query: 502 cttgctgtgaggaggggctgatggttcaacctcaaacagttagaccttgcagtgatggtt 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 cttgctgtgaggaggggctgatggttcaacctcaaacagttagaccttgcagtgatggtt 500
Query: 562 cagcttcagcttctactg 579
||||||||||||||||||
Sbjct: 499 cagcttcagcttctactg 482
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 979
Length adjustment: 10
Effective length of query: 569
Effective length of database: 969
Effective search space: 551361
Effective search space used: 551361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
