Query= MSMg01no427_c22.b1 MSMg01no427_c22.b1 CHROMAT_FILE:
MSMg01no427_c22.b1 PHD_FILE: MSMg01no427_c22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:58 2005
(465 letters)
>mm_chr17_15311726_15312590
Length = 865
Score = 884 bits (457), Expect = 0.0
Identities = 463/465 (99%)
Strand = Plus / Minus
Query: 1 ggctttccctcctccttttatggtatcctcccatatggaatgtaacgctcatcccagcaa 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 665 ggctttccctcctccttttatggtaccctcccatatggaatgtaacgctcatcccagcaa 606
Query: 61 ctgatttaagaagtatccaataatgagctgggaacggtccaagggtcagcttacaggagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 ctgatttaagaagtatccaataatgagctgggaacggtccaagggtcagcttacaggagc 546
Query: 121 tgtaccccaactttcccctcaagatcaaagggtagataaaataataagcatggagatgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 tgtaccccaactttcccctcaagatcaaagggtagataaaataataagcatggagatgaa 486
Query: 181 ctatgtgtccttgtcctcaaagtggcctgttcctgtctgcgtgcctccctctgggtatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 ctatgtgtccttgtcctcaaagtggcctgttcctgtctgcgtgcctccctctgggtatgt 426
Query: 241 ggagttctacctatactttctaccctgtgcctccagtgcaatggagggccctggacctga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 425 ggagttctacctatactttctaccctgtgcctccagtgcaatggagggccctggacccga 366
Query: 301 aggctggtctaggttacagggcacatgaggcagctaggtcctaaggaggttccaggcctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 aggctggtctaggttacagggcacatgaggcagctaggtcctaaggaggttccaggcctg 306
Query: 361 gctctcagctttcccctctgcagcccagtgcagcctcatctctctgcatactgtgcccct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 gctctcagctttcccctctgcagcccagtgcagcctcatctctctgcatactgtgcccct 246
Query: 421 ttccagagtctgcatagaagaccttcaggagaaatcttcctccag 465
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ttccagagtctgcatagaagaccttcaggagaaatcttcctccag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 865
Length adjustment: 10
Effective length of query: 455
Effective length of database: 855
Effective search space: 389025
Effective search space used: 389025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no427_c22.g1 MSMg01no427_c22.g1 CHROMAT_FILE:
MSMg01no427_c22.g1 PHD_FILE: MSMg01no427_c22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:59 2005
(533 letters)
>mm_chr17_15171939_15172869
Length = 931
Score = 990 bits (512), Expect = 0.0
Identities = 529/538 (98%), Gaps = 7/538 (1%)
Strand = Plus / Plus
Query: 1 ttagaattgaaaaaagcatgctaggatttttttttttaacatgtttagttttttgcttta 60
||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 201 ttagaattgaaaacagcatgctaggattttttttt--aacatgtttagttttttgcttta 258
Query: 61 atattcattagggcaattcattttactttttggtttatttatttatttaccagcagttga 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 atattcattagggcaattaattttactttttggtttatttatttatttaccagcagttga 318
Query: 121 ttgtgtatgctgtggtattaaagtaactaagacacacataaacatacacgttcaaatttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ttgtgtatgctgtggtattaaagtaactaagacacacataaacatacacgttcaaatttg 378
Query: 181 tgtgttcatatctatttatgtgctagcctaactgaagagcagttcactgagatgtataga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tgtgttcatatctatttatgtgctagcctaactgaagagcagttcactgagatgtataga 438
Query: 241 tttgggatttagtttatttcagcacacaatttttttatttgtaagtttttaataataaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tttgggatttagtttatttcagcacacaatttttttatttgtaagtttttaataataaaa 498
Query: 301 tttattaaaattcgagggctgaagatcaaacccagggcctcacccatggtaggcagatga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tttattaaaattcgagggctgaagatcaaacccagggcctcacccatggtaggcagatga 558
Query: 361 tctataaaa-----atccagcactgtccattattttgacagacttattgttcaaatttcc 415
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tctataaaagacaaatccagcactgtccattattttgacagacttattgttcaaatttcc 618
Query: 416 tactataatgctagattagtgtatttctcctttaaacctatacattttcctctcatacac 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 tactataatgctagattagtgtatttctcctttaaacctatacattttcctctcatacac 678
Query: 476 acattgatgctctatcagctgcatatttgcaagaattaatgtatcctaggcaactggc 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 acattgatgctctatcagctgcatatttgcaagaattaatgtatcctaggcaactggc 736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 533
Length of database: 931
Length adjustment: 10
Effective length of query: 523
Effective length of database: 921
Effective search space: 481683
Effective search space used: 481683
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
