GGGGTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCCTATCCTCTCCAGGACCAACAATCCTTTATCCTATTCTCC
CATAAGAGTCCCCAAGCTCCAGCCACTTTTTGGGTGTGGGTGTCTGTATC
TGTTTGAGTCAGCCTCTAGGTGGAGTCTCCCAGAGGACAGCATGATCTTG
TCTGCAAGCACAACAAAATATGGGTCTTAAGTTGGGTTGGTTATTGGTTG
GCCATTCCCTCAGTCTCTGCTCTATATCTTGTGCCTGAATTTCTTGTAGG
CAGGATAAATTTTGAATTGAAAGTTTTGTGGGAAGTTTGGTGTCTCTATT
GCTCTACTGGGGTTCCTGCATGGTATCAAGAGTTGGCCTCTTCAGGCTTT
GTATCCCCAATGCTGTGAGTCACAACTACAGTAATCCTCAATTGATTCTT
GGGTATTGCCCTTATACAAGGTCTCTGTCTTACTCTGGAGATGCCCCCCC
TCAATCCCATCAGTTTCAGAATTCCATTAATTTCCATGGCCCTCTGGCCG
TCTTTCCTGTCCTTCCCCAATAATGGCTTTCACACCATATGATTAAATAA
NACTAACGAGTCCAGAGAAATCTAGAGAATGTTCACTGATGAAAGATTTA
CCCTGCTTGCATATTAATTGAGAGAAAGGTTGATACAGACAGAGTCTACT
GTGAGAAGGAAAAGTTTCAGCCCTTTGAGATGTCTCACAAGTAAGTGTTG
TN

NNNNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCCTATTGAATTAAATG
CTCTGTGCTTGCAGGATTCAAAATGTGGGTATTACAGTTCATACTCATTC
CTGCACTGGCACCAGAATTTTGAGGGTGAATTGTGTACTAAAAGTCCCCC
TCCTGTAATAGGACAGCCATTGATCTCCTGGTATAACTACATTTGGGCTG
CAATTCTTAGGCCCAAACTCCCAATCCCCTTACAAGGAAGTTACAAACTA
CTCCCAGCTGAAACCTTATGTATAAGGCAGTGGAAAGAGCTGTGTGCTTA
GGGTGGCAGTAGGGGGTAGAGGTGATTCGGGAACATTTCAAATCATTTGG
AGCTGCAGTCCCATTATCACCTGTCTTGGAGACACAGGAACAGTCTCTGC
CCTTTGAGGCTTGCTCTAGATCTGCGCAGTAAAGCTAGAATCAGGCTAAG
GGAACTTTATGATTCCAATGAAAGGCAGGCAGTCCAGCAAAGCAAGCTCA
TTAAAGCTCTGCTAACTTTTGGGATTGTTAGAATGGTCAAACTAGACTGG
CTAGGTTTCACCCTGCTCTTTCCTTTCACGCAGAGCATATACTGTTGGAC
ATTAGATACTTTTACTCANGAGAGTCCTATCCCACCTTACCTTCCCCGCC
CCAGTTCCCAGTACTCACAATTTGTCGCTGTTAATCCAAAATGGCCCAAG
CCCG

Query= MSMg01no427_f20.g1 MSMg01no427_f20.g1 CHROMAT_FILE:
MSMg01no427_f20.g1 PHD_FILE: MSMg01no427_f20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:49:13 2005
         (547 letters)



>mm_chr17_57908965_57909911
          Length = 947

 Score = 1042 bits (539), Expect = 0.0
 Identities = 545/547 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tttcctattgaattaaatgctctgtgcttgcaggattcaaaatgtgggtattacagttca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 tttcctattgaattaaatgctctgtgcttgcaggattcaaaatgtgggtattacagttca 688

                                                                       
Query: 61  tactcattcctgcactggcaccagaattttgagggtgaattgtgtactaaaagtccccct 120
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 tactcattccttcactggcaccagaattttgagggtgaattgtgtactaaaagtccccct 628

                                                                       
Query: 121 cctgtaataggacagccattgatctcctggtataactacatttgggctgcaattcttagg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 cctgtaataggacagccattgatctcctggtataactacatttgggctgcaattcttagg 568

                                                                       
Query: 181 cccaaactcccaatccccttacaaggaagttacaaactactcccagctgaaaccttatgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 cccaaactcccaatccccttacaaggaagttacaaactactcccagctgaaaccttatgt 508

                                                                       
Query: 241 ataaggcagtggaaagagctgtgtgcttagggtggcagtagggggtagaggtgattcggg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 ataaggcagtggaaagagctgtgtgcttagggtggcagtagggggtagaggtgattcggg 448

                                                                       
Query: 301 aacatttcaaatcatttggagctgcagtcccattatcacctgtcttggagacacaggaac 360
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 447 aacatttcaaatcatttggagctgcagtcccattatcacctatcttggagacacaggaac 388

                                                                       
Query: 361 agtctctgccctttgaggcttgctctagatctgcgcagtaaagctagaatcaggctaagg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 agtctctgccctttgaggcttgctctagatctgcgcagtaaagctagaatcaggctaagg 328

                                                                       
Query: 421 gaactttatgattccaatgaaaggcaggcagtccagcaaagcaagctcattaaagctctg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gaactttatgattccaatgaaaggcaggcagtccagcaaagcaagctcattaaagctctg 268

                                                                       
Query: 481 ctaacttttgggattgttagaatggtcaaactagactggctaggtttcaccctgctcttt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ctaacttttgggattgttagaatggtcaaactagactggctaggtttcaccctgctcttt 208

                  
Query: 541 cctttca 547
           |||||||
Sbjct: 207 cctttca 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 947
Length adjustment: 10
Effective length of query: 537
Effective length of database: 937
Effective search space:   503169
Effective search space used:   503169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)