Query= MSMg01no429_d16.b1 MSMg01no429_d16.b1 CHROMAT_FILE:
MSMg01no429_d16.b1 PHD_FILE: MSMg01no429_d16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:39 2005
(571 letters)
>mm_chr17_33136281_33137255
Length = 975
Score = 810 bits (419), Expect = 0.0
Identities = 440/449 (97%), Gaps = 5/449 (1%)
Strand = Plus / Minus
Query: 127 ttttaggagcagacctgtccctacaactgattgaattttaagagttattccgggtccagg 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 975 ttttaggagcagacctgtccctacaactgattgaattttaagagttattccgggtccagg 916
Query: 187 catggtggcccagacctttaattccaggacagaagaggaagaggcaggggatctctgtga 246
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 915 catggtggcccagacctttaattccaggacagaagaggcagaggcaggggatctctgtga 856
Query: 247 gttcaaggtcagcctgatctacagagttgagttccaggacagccagggctgcacagagaa 306
||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 855 gttcagggccagcctgatctacagag-tgagttccaggacagccagggctgcacagagaa 797
Query: 307 accctgtctcaaaaaacaaaaattctttccagctttgctttttttgaagtttcacatctg 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 accctgtctcaaaaaacaaaaattctttccagctttgctttttttgaagtttcacatctg 737
Query: 367 tttagattataaagtatcctataactaaaacatgaaaacatctataatcttgtgctgtga 426
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 736 tttagattataaagtatcctataagtaaaacatgaaaacatctataatcttgtgctgtga 677
Query: 427 tttcacagaggcaacccaataagaaccctaagcaagacaaaagacaagactgctctccta 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 tttcacagaggcaacccaataagaaccctaagcaagacaaaagacaagactgctctccta 617
Query: 487 agccccagcctccaggaagcaagcccctgtctggggattcttggatcctttcctttctgt 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 agccccagcctccaggaagcaagcccctgtctggggattcttggatcctttcctttctgt 557
Query: 547 c----ttaggggtttccatcgctgtgaag 571
| ||||||||||||||||||||||||
Sbjct: 556 cttagttaggggtttccatcgctgtgaag 528
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 975
Length adjustment: 10
Effective length of query: 561
Effective length of database: 965
Effective search space: 541365
Effective search space used: 541365
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no429_d16.g1 MSMg01no429_d16.g1 CHROMAT_FILE:
MSMg01no429_d16.g1 PHD_FILE: MSMg01no429_d16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:39 2005
(402 letters)
>mm_chr17_32928676_32929476
Length = 801
Score = 692 bits (358), Expect = 0.0
Identities = 391/402 (97%), Gaps = 1/402 (0%)
Strand = Plus / Plus
Query: 1 aaggcttgcctttctacatcaaaagcctggattagaagtgaagcctcctacttcaaatta 60
|||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 201 aaggcttgcctttctacatcaaaaacctggattagaagtggagcctcctacttcaaatta 260
Query: 61 atcatccctccatcacaaatgtggccagttcacttggctaaaatagaactgtgttcatat 120
|||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atcaaccccccatcacaaatgtggccagttcacttggctaaaatagaactgtgttcatat 320
Query: 121 gagaactaacaaagaggttgatacagtcaagccttgggctgaagcccctggtgtgacaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagaactaacaaagaggttgatacagtcaagccttgggctgaagcccctggtgtgacaga 380
Query: 181 catattataaagtaggaaatacatgagtaatctgaacaaactgttcctaaaatacgaaac 240
|||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 381 catactataaagtaggaaatacatgagtaatctgaacaaactgttcctaaaatatgaaac 440
Query: 241 caagcaaaggatgggtattgagagaagagcaaaacagacaaaggggactatcctggtcat 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caagcaaaggaggggtattgagagaagagcaaaacagacaaaggggactatcctggtcat 500
Query: 301 gcaaagtcaaacatgggaagacttgtgttgagatgcagatccagggggaaatgttagtaa 360
|||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 501 tcaaagtcaaacatgggaagacttgtgttgagatggagatcc-gggggaaatgttagtaa 559
Query: 361 taaggaaaacggggtggttattcacccctaaaatatttaaag 402
||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 560 taaggaaaatggggtggttattcacccctaaaatatttaaag 601
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 402
Length of database: 801
Length adjustment: 9
Effective length of query: 393
Effective length of database: 792
Effective search space: 311256
Effective search space used: 311256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
