XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCATTTT
TTACGTGAAAAGACAGGAAAATCAGGATATGGAGGTGAGACAGTTGAGGA
AAGAGTCTAAATTTTCAATGATTCCAGATGTAGTTTTGCAAACTACGTTT
TCAAAAAAGTCTACAGCATGACATTCTGTTGATTAATTTCTTCCTCATTT
TCATCTAGTATATTTTTGACAACTTTTGAGGAGTTTTAATGATTATCTAT
GTTGTGATAAATGAATTTGAATTGGGTAAAAAATGAATCTGTTTTTCCAA
GAATCTTTTTCCTAAAGTCTACACTCAGATGTATCTTAAGACACAATTTC
TGGCATATGCATATTTCGAAAAACATGTTGTACTGCAAATCACTGTAAAG
ACAGTAGGCAGTTGAAGCTTACATACTCCCTTTTTTTTCCACAGAAAAAG
AAAGGTTTTGATGGTCAAATATAAATAAATGTGATTCCAAAATAATGTTT
TGATAATTCGTCACAAAAAGAATAGAACAGGTTTCACTTAGTGTTTTCAT
AGTTTATGCTTTATTTATATTGGCAGCGCTTCTCAAGCTCTTTATGTTGG
AAGAAGCTATGCTGCTCTCTCTTTAATCCTCATTTGCTTTTAAAACCCCT
TTTTAAACTAATCTGCTATAGTGGCTTATCTGAATGGGTGAGGCAGTACT
CCACCCCCCCTCAATAAAAACCCATGAATTCAGAAACCTTAATGAC

AGTGCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTTAGAACCCACATATACTATCTACTTCTTCCC
AGCAAGGGCCTTTAGTTAATGTGCTTTTGTTTTGTTTTGTTTTGTTTTGT
TTTGTTTTGTTATGTTATTTTTTTTGTCTTACTGAGCTCATTGTCTCTGG
GGGTGGCAGGGTAGGGAGTTCTGTCAAATGAGCATGAGTCAGCAGGAGCA
ACCAGAATCAGATGGGACATGACAAGTTCTCTCCCATGAAGTGAACATCT
GTGATGATATGAGATCAACTTAGCATTGCAACATGAGCTATACAACCACA
CTGTCACTGTCCTTTGACTCTTATTTATATTCTCTCCAAACATCACATGA
CCTCCAGGAGGCCCTCACTCAACAAAACAATGTGAGCCTGCATCAGTAAT
GCATCTCATGACACCTCCAGAAAACTTGTGTCTTCCTACCCTTTAACTGC
CCCCCCATTCTCCAAAACAGCTACTTCCTGCCGAGCGCCACCCTTACCCC
CCCCCCTCCCCTTTCCGACATCTTTTCTAACAGTTGTGTCCCCAACCGCA
CCTGGGCCCCATACCCTCTCTCGCCTTTTCCCCCCCCGGCTTTGCGTCCC
CCCCCTCCCCCTGTGGTTCTTTTTTTCCCCCCTTCCCTCTTTCTCCCCCC
TCTCCCTCTCTTTCCCCTACTCTTTCCCCCCTTTTTTATCCCTTTTCCCC
CCACTCTCTCCTG

Query= MSMg01no429_l22.b1 MSMg01no429_l22.b1 CHROMAT_FILE:
MSMg01no429_l22.b1 PHD_FILE: MSMg01no429_l22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:19 2005
         (585 letters)



>mm_chr17_60959269_60960253
          Length = 985

 Score = 1004 bits (519), Expect = 0.0
 Identities = 567/583 (97%), Gaps = 4/583 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcattttttacgtgaaaagac-aggaaaatcaggatatggaggtgagacagttgag 63
           |||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 785 gaattcattttttatgtgaaaagacaaggaaaatcaggatgtggaggtgagacagttgag 726

                                                                       
Query: 64  gaaagagtctaaattttcaatgattccagatgtagttttgcaaactacgttttcaaaaaa 123
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 aaaagagtctaaattttcaatgattccagatgtagttttgcaaactacgttttcaaaaaa 666

                                                                       
Query: 124 gtctacagcatgacattctgttgattaatttcttcctcattttcatctagtatatttttg 183
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 665 gtctacagcatgacattctgttgattaatttcttcctcattttcatctggtatatttttg 606

                                                                       
Query: 184 acaacttttgaggagttttaatgattatctatgttgtgataaatgaatttgaattgggta 243
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 605 acaacttttgaggagttttaatgattatctatgttgcgataaatgaatttgaattgggta 546

                                                                       
Query: 244 aaaaatgaatctgtttttccaagaatctttttcc-taaagtctacactcagatgtatctt 302
           ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||
Sbjct: 545 aaaaatgaatctgtttttccaagaatc-ttttccataaagtctacactcagatgtatctt 487

                                                                       
Query: 303 aagacacaatttctggcatatgcatatttcgaaaaacatgttgtactgcaaatcactgta 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 aagacacaatttctggcatatgcatatttcgaaaaacatgttgtactgcaaatcactgta 427

                                                                       
Query: 363 aagacagtaggcagttgaagcttacatactcccttttttttccacagaaaaagaaaggtt 422
           ||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 426 aagactgtaggcagttgaagcttacatactcccttgtttt-ccacagaaaaagaaaggtt 368

                                                                       
Query: 423 ttgatggtcaaatataaataaatgtgattccaaaataatgttttgataattcgtcacaaa 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ttgatggtcaaatataaataaatgtgattccaaaataatgttttgataattcgtcacaaa 308

                                                                       
Query: 483 aagaatagaacaggtttcacttagtgttttcatagtttatgctttatttatattggcagc 542
           ||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||| 
Sbjct: 307 aagaataaaacagttttcactaagtgttttcatagtttatgctttatttatattggcagt 248

                                                      
Query: 543 gcttctcaagctctttatgttggaagaagctatgctgctctct 585
           |||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 247 gcttctcaagctctttatgttggaagaagctatgctactctct 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 985
Length adjustment: 10
Effective length of query: 575
Effective length of database: 975
Effective search space:   560625
Effective search space used:   560625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)