Query= MSMg01no431_d15.b1 MSMg01no431_d15.b1 CHROMAT_FILE:
MSMg01no431_d15.b1 PHD_FILE: MSMg01no431_d15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:26 2005
(520 letters)
>mm_chr17_28520995_28521914
Length = 920
Score = 841 bits (435), Expect = 0.0
Identities = 510/561 (90%), Gaps = 47/561 (8%)
Strand = Plus / Plus
Query: 2 ttccaggacagttacc---gctacacagaggaaaccctatctcgaaaaattaaaaaagaa 58
||||||||||| || |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 165 ttccaggacag---ccagggctacacaga-gaaaccctatctcgaaaaattaaaaaagaa 220
Query: 59 -------------------aaaggaaggaaggaaggaaggaagg---------------- 83
|||||||||||||||||||||||||
Sbjct: 221 aaaaagaaaaaagaaaaagaaaggaaggaaggaaggaaggaaggaagaaagaaagaaaga 280
Query: 84 aagaaagaaagagagaaagaaagaaa---agaaagaaagaaggcttctaggtcatcccca 140
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 281 aagaaagaaagagagaaagaaagaaagagagaaagaaagaaggcttctaggtcatcccca 340
Query: 141 gctacacagagtttgaggctagcctgatctacgtgagactctgccttaaaacagcaatag 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 gctacacagagtttgaggctagcctgatctacgtgagactctgccttaaaacagcaatag 400
Query: 201 gtacttgagagatgggtcataaccattcctaacttcaggtctgtgggatctggcgccctc 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 gtacttgagagatgggtcataaccattcctaacttcaggtctgtgggatctggcgccctc 460
Query: 261 ttctggccttctcgg-tatcttgtttgcacatgatatacatatacacattcaaacataca 319
|||||||||||| || | ||||||||||||||||||||||||| |||||||||||||||
Sbjct: 461 ttctggccttcttggaca-cttgtttgcacatgatatacatatatacattcaaacataca 519
Query: 320 tatatacaggcaaacactcacacacacacacaaaagaaatctaatagcaacaaagttgaa 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 tatatacaggcaaacactcacacacacacacaaaagaaatctaatagcaacaaagttgaa 579
Query: 380 atttgggagccatctcattaaactgtttggctggaggcctactggcctcaaaaccgaacc 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 atttgggagccatctcattaaactgtttggctggaggcctactggcctcaaaaccgaacc 639
Query: 440 gcatcttctaatgcacaaacacagggcatccccttgtaggctctggactttactccccga 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 640 gcatcttctaatgcacaaacacagggcatccccttgtaggctctggactttactcccgga 699
Query: 500 gactgtgcttcgcagctttct 520
|||||||||||||||||||||
Sbjct: 700 gactgtgcttcgcagctttct 720
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 920
Length adjustment: 10
Effective length of query: 510
Effective length of database: 910
Effective search space: 464100
Effective search space used: 464100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no431_d15.g1 MSMg01no431_d15.g1 CHROMAT_FILE:
MSMg01no431_d15.g1 PHD_FILE: MSMg01no431_d15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:26 2005
(436 letters)
>mm_chr17_28683259_28684094
Length = 836
Score = 812 bits (420), Expect = 0.0
Identities = 432/436 (99%)
Strand = Plus / Minus
Query: 1 attatgaaggagttgtatagcagccaatggctgaattcacccagagtcctcaaagttggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 attatgaaggagttgtatagcagccaatggctgaattcacccagagtcctcaaagttggt 577
Query: 61 acccaccccacccccgctcctaaatgggcagtagacttgacctttgagagccagtgatag 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 acccaccccacccccactcctaaatgggcagtagacttgacctttgagagccagtgatag 517
Query: 121 agacagagctgactgtagagaaggtacagatgtcccgacttctagaaagtccttctgcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 agacagagctgactgtagagaaggtacagatgtcccgacttctagaaagtccttctgcca 457
Query: 181 ttccttaaacctattcagtcagtgtatgcaagaccgagccacacctacagaactgttggg 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 456 ttccttaaacctattcagtcagtgtacgcaagaccgagccacacctacagaactgttggg 397
Query: 241 gtccgtggtcctctgagcagaggagccgccttcttcatgggatcaggtgtacctgcttgc 300
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 396 gtccgtggtcctctgagcagaggagccgccttcttcatggaatcaggtgtacctgcttgc 337
Query: 301 aagaggacaacacatcaggcctgctgactgctccctcaagggaacacggagaaccacggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 aagaggacaacacatcaggcctgctgactgctccctcaagggaacacggagaaccacggg 277
Query: 361 gtcagctgagaatccagccaccttcctctgcccctcttggtatttgtatacaattgtgcc 420
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 gtcagctgagattccagccaccttcctctgcccctcttggtatttgtatacaattgtgcc 217
Query: 421 ctaatttcacatggcc 436
||||||||||||||||
Sbjct: 216 ctaatttcacatggcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 836
Length adjustment: 9
Effective length of query: 427
Effective length of database: 827
Effective search space: 353129
Effective search space used: 353129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
