Query= MSMg01no432_b04.b1 MSMg01no432_b04.b1 CHROMAT_FILE:
MSMg01no432_b04.b1 PHD_FILE: MSMg01no432_b04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:39 2005
(541 letters)
>mm_chr17_57100304_57101245
Length = 942
Score = 1004 bits (519), Expect = 0.0
Identities = 534/539 (99%), Gaps = 1/539 (0%)
Strand = Plus / Plus
Query: 4 ggaattccatgggttctatactaaaattgcaccattgcacaaaagggacctgagggcctg 63
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccatgggttctaaactaaaattgcaccattgcacaaaagggacctgagggcctg 263
Query: 64 caagagggctcagcaggttgaagatgcttgctgcaatgtctgatgacctggattaggtcc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 caagagggctcagcaggttgaagatgcttgctgcaatgtctgatgacctggattaggtcc 323
Query: 124 ccagaacctgcatggtgaaaagagaactgatttcccacaggatgtcccctgatgtgtcct 183
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ccagaacctgcgtggtgaaaagagaactgatttcccacaggatgtcccctgatgtgtcct 383
Query: 184 cccaccacatgttccccaccacaatgcctctaactggaagccaaaataaactcttacatt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cccaccacatgttccccaccacaatgcctctaactggaagccaaaataaactcttacatt 443
Query: 244 gccttggcaaagtattttatcacagccacatgacaggtaactacacagatttctgacact 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gccttggcaaagtattttatcacagccacatgacaggtaactacacagatttctgacact 503
Query: 304 catccctacctcttcaccctccgctaaaccatgatgtgacttggtcagtcctgtaggaag 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 catccctacctcttcaccctccgctaaaccatgatgtgacttggtcagtcctgtaggaag 563
Query: 364 taaaccctagagac-aacagcaccttagtcatgctgatctgagtctctgctttcttctat 422
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 taaaccctagagacgaacagcaccttagtcatgctgatctgagtctctgctttcttctat 623
Query: 423 tgtaacaaaaatacttgtcaggctcccttgcagctcccttgcatacaaccatgtgaccag 482
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||
Sbjct: 624 tgtaacaaaaatacttgtcaggctcccttgcagctcccttgcatacgaccatgtgactag 683
Query: 483 gctttagccattgagatccagacataaccatagtgctcaggttgtgtttctaaaggttt 541
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gctttagccattgagatccagacataaccatagtgctcaggttgtgtttctaaaggttt 742
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 541
Length of database: 942
Length adjustment: 10
Effective length of query: 531
Effective length of database: 932
Effective search space: 494892
Effective search space used: 494892
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no432_b04.g1 MSMg01no432_b04.g1 CHROMAT_FILE:
MSMg01no432_b04.g1 PHD_FILE: MSMg01no432_b04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:39 2005
(412 letters)
>mm_chr17_57241594_57242405
Length = 812
Score = 578 bits (299), Expect = e-169
Identities = 309/313 (98%), Gaps = 2/313 (0%)
Strand = Plus / Minus
Query: 102 gacaaacagacagacaagggggattttaatattaaaattaatttgtttttgaacaggatc 161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 gacaaacagacagacaagggggattttaatattaaaattaatttgtttttgaacaggatc 753
Query: 162 tcgtgtagtcaaggctggcctgacattccctatgtagtaaagaataaacttctaatcctc 221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 tcgtgtagtcaaggctggcctgacattccctatgtagtaaagaataaacttctaatcctc 693
Query: 222 ctgcctccatttctggagtgctaagttgacaggtccatgccaccatgtctggtgtataag 281
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 692 ctgcctccatttctggagtgctaaattgacaggtccatgccaccatgtctggtgtataag 633
Query: 282 atgctggggatagaactc--gtctccccctcccccctggctcacacacaaagtccacccc 339
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 atgctggggatagaactcaagtctccccctcccccctggctcacacacaaagtccacccc 573
Query: 340 ctgccccttattgctaagaagaaagatttagcatctcaggaccgtagtggtggtagtagt 399
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 572 ctgccccttattgctaagaagaaagatttagcatctcaggaccgtagtggtagtagtagt 513
Query: 400 agtagtagtagta 412
|||||||||||||
Sbjct: 512 agtagtagtagta 500
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 412
Length of database: 812
Length adjustment: 9
Effective length of query: 403
Effective length of database: 803
Effective search space: 323609
Effective search space used: 323609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
