Query= MSMg01no433_c19.b1 MSMg01no433_c19.b1 CHROMAT_FILE:
MSMg01no433_c19.b1 PHD_FILE: MSMg01no433_c19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:11 2005
(535 letters)
>mm_chr17_14624727_14625662
Length = 936
Score = 920 bits (476), Expect = 0.0
Identities = 518/532 (97%), Gaps = 1/532 (0%)
Strand = Plus / Minus
Query: 5 gaattctcttcatac-caagactcctacatggcactagttgctcagtcagcccctacttc 63
|||||||||||| || |||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 736 gaattctcttcagacagaagactcctacatggcactagttgctcagttagcgcctacttc 677
Query: 64 ctttgcaaagtaagggtagacaatacctacctagacctcctaattttaccctttccatct 123
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 ctttgcaaagtaaggatagacaatacctacctagacctcctaattttaccctttccatct 617
Query: 124 ctccttgataaacacagcagactgagacacttaacattactttcagaacaatctggattt 183
||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 616 ctccttgataaacacagcagactgagacacttaccattacttccagaacaatctggattt 557
Query: 184 tacatctataccaacaccctaaacggcaagatcaggaacgaatggccagaccctagtacc 243
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 556 tacatctacaccaacaccctaaacggcaagatcaggaatgaatggccagaccctagtacc 497
Query: 244 ctataatttgcattacacaaattacacatcacaaatggaaatgtcttctctcttgtctct 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 ctataatttgcattacacaaattacacatcacaaatggaaatgtcttctctcttgtctct 437
Query: 304 actccttacaagatgtcatgtttaaggaatcgagagagctgcataccatcagtcctgggg 363
||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||
Sbjct: 436 actccttacaagatgtcatgtttgaggaatcgggagagctgcataccatcagtcccaggg 377
Query: 364 gacaaggcttaccataatttaacaacttgtgcattggagcacatttctcaaatgaggtaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gacaaggcttaccataatttaacaacttgtgcattggagcacatttctcaaatgaggtaa 317
Query: 424 tatataaacttgaatttcttgggacgtctgggttgtcagaagatgtttcacagaaaacaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 tatataaacttgaatttcttgggacgtctgggttgtcagaagatgtttcacagaaaacaa 257
Query: 484 cagggactctctggagcctggatgagcaagcccagctctgaggcattcatga 535
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 cagggactctctggagcctggatgagcaagcccagctctgaggcattcatga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 535
Length of database: 936
Length adjustment: 10
Effective length of query: 525
Effective length of database: 926
Effective search space: 486150
Effective search space used: 486150
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no433_c19.g1 MSMg01no433_c19.g1 CHROMAT_FILE:
MSMg01no433_c19.g1 PHD_FILE: MSMg01no433_c19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:11 2005
(338 letters)
>mm_chr17_14418775_14419512
Length = 738
Score = 603 bits (312), Expect = e-177
Identities = 331/343 (96%), Gaps = 10/343 (2%)
Strand = Plus / Plus
Query: 1 aattcatagaaataaatgggcctctcagttcacaggagtatacgggactcacagtccatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aattcatagaaataaatgggcctctcagttcacaggagtatacgggactcacagtccatg 260
Query: 61 gggatgtgtgggggccaggtttcttctggatgggtgtgtgatcttatgcaagtgactgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gggatgtgtgggggccaggtttcttctggatgggtgtgtgatcttatgcaagtgactgaa 320
Query: 121 cctcttcggtcttacctatagaatgaggaagactacccagcatgtcctaagggttaaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctcttcggtcttacctatagaatgaggaagactacccagcatgtcctaagggttaaagg 380
Query: 181 taacgtttgatgcactcagactacactcattctccaatccagattatgctgttggaaggg 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taacatttgatgcactcagactacactcattctccaatccagattatgctgttggaaggg 440
Query: 241 agtttattttt-----cagctcttacactgttgtgtcattacggggtgtttgggtattag 295
|||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agttta-----gaagccagctcttacactgttgtgtcattacggggtgtttgggtattag 495
Query: 296 agtagattccttgcctggcttanatgagagaaatcatgtgggc 338
|||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 496 agtagattccttgcctggcttagatgagagaaatcatgtgggc 538
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 738
Length adjustment: 9
Effective length of query: 329
Effective length of database: 729
Effective search space: 239841
Effective search space used: 239841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
