Query= MSMg01no433_f05.b1 MSMg01no433_f05.b1 CHROMAT_FILE:
MSMg01no433_f05.b1 PHD_FILE: MSMg01no433_f05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:23 2005
(384 letters)
>mm_chr17_63638018_63638801
Length = 784
Score = 629 bits (325), Expect = 0.0
Identities = 364/381 (95%), Gaps = 10/381 (2%)
Strand = Plus / Plus
Query: 5 gaattctcatgattgcagagaaaagtcatttcatagagcagactggaatggaccttcaat 64
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcatgaatggagagaaaagtcatttcatagagcagactggaatggaccttcaat 264
Query: 65 gctagatagagaataacaggcaatggtggtggtggctcagaaagagtgaaaaggctggtg 124
|||||||||||||||||||||||||| |||||||||||||||||||||| || ||||
Sbjct: 265 gctagatagagaataacaggcaatggcagtggtggctcagaaagagtgaa---gcaggtg 321
Query: 125 gtgccactga-aagactggagtgccagcttggcttcactcaatgaatcgcaattgctcaa 183
| | || ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 g----a--gagaaggctggagtgccagcttggcttcactcaatgaatcgcaattgctcaa 375
Query: 184 agctgcagtatggaagtctgcctgttgggattgtgacatgagacctcacatatgttctca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 agctgcagtatggaagtctgcctgttgggattgtgacatgagacctcacatatgttctca 435
Query: 244 gggttgcctttcagtacaaagaaggcaggtagcaagcactgcttaccctggatacactgc 303
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 436 gggttgcctttcagtacaaagaaggcagggagcaagcactgcttaccctggatacactgc 495
Query: 304 agagttctaagtgtaaacgggaaatgtgggacacggctttaaaggctagaacataaagag 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 agagttctaagtgtaaacgggaaatgtgggacacggctttaaaggctagaacataaagag 555
Query: 364 gcatgttcaacccaagtgtct 384
|||||||||||||||||||||
Sbjct: 556 gcatgttcaacccaagtgtct 576
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 384
Length of database: 784
Length adjustment: 9
Effective length of query: 375
Effective length of database: 775
Effective search space: 290625
Effective search space used: 290625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no433_f05.g1 MSMg01no433_f05.g1 CHROMAT_FILE:
MSMg01no433_f05.g1 PHD_FILE: MSMg01no433_f05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:23 2005
(402 letters)
>mm_chr17_63795655_63796456
Length = 802
Score = 754 bits (390), Expect = 0.0
Identities = 399/402 (99%)
Strand = Plus / Minus
Query: 1 cttctttgacaatgttatttattcatgtttaaaagtgattctgattatcataccttccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 cttctttgacaatgttatttattcatgtttaaaagtgattctgattatcataccttccac 543
Query: 61 gctttgttccctcttccacctgcataactccccagaatgttttgatatcatcgatataaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gctttgttccctcttccacctgcataactccccagaatgttttgatatcatcgatataaa 483
Query: 121 atttattgcacaattgatgttataccgttcacctcgtctaagtatttggggagactagaa 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 482 atttattgcacaattgatgttataccgttcacctcgtataagtatttggggagactagaa 423
Query: 181 taagatggcagattttaaagcactttgtaaagcttgaaaatatataaaaatgaattttag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 taagatggcagattttaaagcactttgtaaagcttgaaaatatataaaaatgaattttag 363
Query: 241 aattgcaggaatgtaatgataatgatgaaataaagtgcaccacttttataaatattaatt 300
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 aatggcaggaatgtaatgataatgatgaaataaagtgcaccacttttataaatattaatt 303
Query: 301 tgcactttgctcctttttgttgattattcttcttattggcttactagtaggtactgtgtg 360
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 302 tgcactttgctcctttttgttgattattcttcttattggcttactagcaggtactgtgtg 243
Query: 361 caggatgcttgcttataaacttgctcatgagaaggtcttaag 402
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 caggatgcttgcttataaacttgctcatgagaaggtcttaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 402
Length of database: 802
Length adjustment: 9
Effective length of query: 393
Effective length of database: 793
Effective search space: 311649
Effective search space used: 311649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
