Query= MSMg01no436_j10.b1 MSMg01no436_j10.b1 CHROMAT_FILE:
MSMg01no436_j10.b1 PHD_FILE: MSMg01no436_j10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:42 2005
(504 letters)
>mm_chr17_30817063_30817966
Length = 904
Score = 951 bits (492), Expect = 0.0
Identities = 501/504 (99%)
Strand = Plus / Plus
Query: 1 attgaaatctcttggtttaattaatgtccacatctgggccctagggacaagctggtttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attgaaatctcttggtttaattaatgtccacatctgggccctagggacaagctggtttgt 260
Query: 61 tttttatttcggaaggaaatagaaaaggttatcggaggatatttcaaactgttaatctag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttttatttcggaaggaaatagaaaaggttatcggaggatatttcaaactgttaatctag 320
Query: 121 cagaagttataacagactaaatgctagttatgaggaacagcaatgagggtaagtgctggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagaagttataacagactaaatgctagttatgaggaacagcaatgagggtaagtgctggg 380
Query: 181 aatggatatcatcaaaatacgccgtatgcatctatgacactgtttacaaattagtaaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatggatatcatcaaaatacgccgtatgcatctatgacactgtttacaaattagtaaaat 440
Query: 241 atatttaaaagatgtctggagagatggcctagaaactaggagcacttgccgttcttgcag 300
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atatttaaaagagggctggagagatggcctagaaactaggagcacttgccgttcttgcag 500
Query: 301 aggacggttcagtccccagcacccatgtggtggttccctattgcctgggaacatgaactt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aggacggttcagtccccagcacccatgtggtggttccctattgcctgggaacatgaactt 560
Query: 361 gtgtggccctgccagtaagaaggggacgttgtccttgagatggctggacacagacacctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtgtggccctgccagtaagaaggggacgttgtccttgagatggctggacacagacacctg 620
Query: 421 tctccttagtagttgctcctgagtggtctagatcctatttcctcacacagatgctgttca 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 621 tctccttagtagttgctcctgagtggtctagatcctatttcctcacacagatgccgttca 680
Query: 481 gctataggaaattcccaagctctc 504
||||||||||||||||||||||||
Sbjct: 681 gctataggaaattcccaagctctc 704
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 904
Length adjustment: 10
Effective length of query: 494
Effective length of database: 894
Effective search space: 441636
Effective search space used: 441636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no436_j10.g1 MSMg01no436_j10.g1 CHROMAT_FILE:
MSMg01no436_j10.g1 PHD_FILE: MSMg01no436_j10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:42 2005
(373 letters)
>mm_chr17_30980142_30980914
Length = 773
Score = 603 bits (312), Expect = e-177
Identities = 333/344 (96%), Gaps = 8/344 (2%)
Strand = Plus / Minus
Query: 1 atataggaaaattagtctggtactttgccaccgtgtgctttgcccatcagtgactaagga 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 540 atataggaaaattagtctggtgctttgccaccgtgtgctttgcccatcagtgactaagga 481
Query: 61 tgtgctgagctggatctcattaaagaggacccctgacttgtctggcattcacctgtgttg 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 tgtgctgagctgggtctcattaaagaggacccctgacttgtctggcattcacctgtgttg 421
Query: 121 atgtctgtggcccctatggtttctctcggatgcagcgactcatggtagcaacgtggctgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 atgtctgtggcccctatggtttctctcggatgcagcgactcatggtagcaacgtggctgt 361
Query: 181 ccacagatgcctgaaagattattttgactagaacattccttttggagagaggccaaatgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ccacagatgcctgaaagattattttgactagaacattccttttggagagaggccaaatgg 301
Query: 241 caag----ttttacttctaccttcaaaagcagaggcaaaaccaaaggaggaaacaggaca 296
|||| |||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 300 caagcaac----acttctaccttcaaaagcagaggcaaaaccaaagaaggaaacaggaca 245
Query: 297 caaatcctgcaacataggtcacagataaaagatgggaatcgtgt 340
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 caaatcctgcaacataggtcacagataaaagatgggaatcgtgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 773
Length adjustment: 9
Effective length of query: 364
Effective length of database: 764
Effective search space: 278096
Effective search space used: 278096
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
