Query= MSMg01no438_f05.b1 MSMg01no438_f05.b1 CHROMAT_FILE:
MSMg01no438_f05.b1 PHD_FILE: MSMg01no438_f05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:04 2005
(515 letters)
>mm_chr17_85710452_85711363
Length = 912
Score = 938 bits (485), Expect = 0.0
Identities = 504/511 (98%), Gaps = 3/511 (0%)
Strand = Plus / Minus
Query: 5 gaattctctgccgtttcctctgtgagttaagtttttatgtgttgttggaaatgaaggcaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 gaattctctgccgtttcctctgtgagttaagtttttatgtgttgttggaaatgaaggcaa 653
Query: 65 caccagcaaaagcgttctgataacttagaatgacctcatcagcatggctgggacattctg 124
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 caccagcaaaaacgttctgataacttagaatgacctcatcagcatggctgggacattctg 593
Query: 125 aatgtaatcaaaggggcaagtgagaataaaaaaatattctttcacagacgagcctgccct 184
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 592 aatgtaatcaaaggggcaagtgagaat-aaaaaatattctttcacagacgagcctgccct 534
Query: 185 gccatgggaattcacagcctgtgcgcacagaatgaatttcctaccctggcaaacgttgtt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 gccatgggaattcacagcctgtgcgcacagaatgaatttcctaccctggcaaacgttgtt 474
Query: 245 ccgatcataacggagccaccaccaggaggatggtgggtaccgcagagctgttctgcaaga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 ccgatcataacggagccaccaccaggaggatggtgggtaccgcagagctgttctgcaaga 414
Query: 305 ggtgtcgcgtggcacatcagttcgttccgagccagtatcactgacagccacgagtctaca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 ggtgtcgcgtggcacatcagttcgttccgagccagtatcactgacagccacgagtctaca 354
Query: 365 gaagcagccggagcttgaggaagactcaggattgctcacagacaaatgagagacaggaga 424
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 353 gaagcagccggagcttgaggaagactcgggattgctcacagacaaatgagagacagggga 294
Query: 425 gttgagaaacagccttctgtgaacggttaaaggtaaactttaagataccagactctgtca 484
|||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct: 293 gttgagaaacagccttctgtgaac--ttaaaggcaaactttaagataccagactctgtca 236
Query: 485 ttttgaagggtcataatgaaaaaaaagtcaa 515
|||||||||||||||||||||||||||||||
Sbjct: 235 ttttgaagggtcataatgaaaaaaaagtcaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 912
Length adjustment: 10
Effective length of query: 505
Effective length of database: 902
Effective search space: 455510
Effective search space used: 455510
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no438_f05.g1 MSMg01no438_f05.g1 CHROMAT_FILE:
MSMg01no438_f05.g1 PHD_FILE: MSMg01no438_f05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:04 2005
(245 letters)
>mm_chr17_85489738_85490382
Length = 645
Score = 466 bits (241), Expect = e-136
Identities = 244/245 (99%)
Strand = Plus / Plus
Query: 1 gggagggtgcacggaagagctgtgggccagaggccgggcgtcacaggtcctgacagggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gggagggtgcacggaagagctgtgggccagaggccgggcgtcacaggtcctgacagggaa 260
Query: 61 gaagttggcaggtcctgactggggagagccgtggcggaggcaacctccgggtccagtcag 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 261 gaagttggcaggtcctgactggggagagccgtggcggacgcaacctccgggtccagtcag 320
Query: 121 ctctggagatggagtcgcaggtcgcggccgctggggctgcagagactgaggcagaggcgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctctggagatggagtcgcaggtcgcggccgctggggctgcagagactgaggcagaggcgg 380
Query: 181 gcaagcgtcccgcgatgggcagtgccagccagggctcgctggtctcggcgcccaaggggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcaagcgtcccgcgatgggcagtgccagccagggctcgctggtctcggcgcccaaggggg 440
Query: 241 ccgtc 245
|||||
Sbjct: 441 ccgtc 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
