Query= MSMg01no441_a07.b1 MSMg01no441_a07.b1 CHROMAT_FILE:
MSMg01no441_a07.b1 PHD_FILE: MSMg01no441_a07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:39 2005
(538 letters)
>mm_chr17_29065279_29066216
Length = 938
Score = 893 bits (462), Expect = 0.0
Identities = 505/522 (96%), Gaps = 7/522 (1%)
Strand = Plus / Minus
Query: 19 tacatagtgagttccaggccagccaggaatacatggtgaattctaggccctatctatctt 78
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 751 tacatagtgagttccaggccagccaggaatacatggtgaattctaggcc----ctatctt 696
Query: 79 aaaaaaag--aaaaaatgtaataggggtgaagatgactctagggtgaaaggtgcttgcca 136
|||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 695 aaaaaaagaaaaaaaatgtaataggggtgaagatgtctctagggtgaaaggtgcttgcca 636
Query: 137 ccaagcctgaagccgcgggttcaatcccaggaggggtgagataggactcacaaaaatctt 196
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 635 ccaagcctgaagccgcgggttcaatcccaggaggggtgagagaggactcacaaaaatctt 576
Query: 197 cttctgccctctagacactgtggcacgagccatcaagggaaacaggattactttttaaat 256
||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 575 cttctgccctctagacactgtggcacgagccatcaagggaaacaggattacctggcaaat 516
Query: 257 ggatgctgacaaactgctaagcttgtagattcagtgttacccaacagatcctgacatggg 316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 ggatgctgacaaactgctaagcttgtagattcagtgttacccaacagatcctgacatggg 456
Query: 317 agagacacaaaggtgtttgttcatctgtttcagacatatgcccttggcaggcagcaggtt 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 agagacacaaaggtgtttgttcatctgtttcagacatatgcccttggcaggcagcaggtt 396
Query: 377 caaggctaacctgggctacgtgagattccatctcaaaaaagagaaagggggcaggggagc 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 caaggctaacctgggctacgtgagattccatctcaaaaaagagaaagggggcaggggagc 336
Query: 437 tggctccgtggtgaaagtgtgagctgctctagagtcccaagagcccacactgggcggctc 496
|||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 335 tggctccgtggtgaaagtgtgagctgctctagaggacca-gagcccacactgggcggctc 277
Query: 497 acgagggccctgtgattctagctgcagggtatgcaccgtctc 538
|||||||||||||||||||||||||||||||||||| ||||
Sbjct: 276 gcgagggccctgtgattctagctgcagggtatgcaccatctc 235
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 538
Length of database: 938
Length adjustment: 10
Effective length of query: 528
Effective length of database: 928
Effective search space: 489984
Effective search space used: 489984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no441_a07.g1 MSMg01no441_a07.g1 CHROMAT_FILE:
MSMg01no441_a07.g1 PHD_FILE: MSMg01no441_a07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:39 2005
(144 letters)
>mm_chr17_28900274_28900818
Length = 545
Score = 244 bits (126), Expect = 2e-69
Identities = 139/148 (93%), Gaps = 9/148 (6%)
Strand = Plus / Plus
Query: 1 tcagaaaacaggtgttgaatgagtgtgtgagcaggtcctcccatggggtttggttcttgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcagaaaacaggtgttgaatgagtgtgtgagcaggtcctcccatggggtttggttcttgc 260
Query: 61 gtttaactcattgtgaattttttag-----cccaaagggctggaccaaactgcagctgcc 115
||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 261 gtttaactcattgtgaatt----agaagagcccaaagggctggaccaaactgcagctgcc 316
Query: 116 gcctgtcccccggagggagcatctgatg 143
||||||||||||||||||||||||||||
Sbjct: 317 gcctgtcccccggagggagcatctgatg 344
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 144
Length of database: 545
Length adjustment: 8
Effective length of query: 136
Effective length of database: 537
Effective search space: 73032
Effective search space used: 73032
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
