Query= MSMg01no441_b02.b1 MSMg01no441_b02.b1 CHROMAT_FILE:
MSMg01no441_b02.b1 PHD_FILE: MSMg01no441_b02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:43 2005
(190 letters)
>mm_chr17_32304729_32305320
Length = 592
Score = 337 bits (174), Expect = 4e-97
Identities = 184/188 (97%), Gaps = 3/188 (1%)
Strand = Plus / Minus
Query: 5 gaattcacagatctatctgcctttgcctctggagaccgtgtgaaccatgacatcttcccc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 gaattcacagatctatctgcctttgcctctggagaccgtgtgaaccatgacatcttcccc 286
Query: 65 aattaacaaaaatacacttatttattatgtagccagttggggggggg--cgcggcaggga 122
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 285 aattaacaaaaatacacttatttattatgtagccagttgggggggggggcgcggcaggga 226
Query: 123 ggggagatgggccctctacaatgtagagatcagaggacaacttgtggaagttggctctct 182
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 225 ggggagatgggccctctacaatgtagagatcagaggacaacttgtggaagttgt-tctct 167
Query: 183 cctcccac 190
||||||||
Sbjct: 166 cctcccac 159
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 190
Length of database: 592
Length adjustment: 8
Effective length of query: 182
Effective length of database: 584
Effective search space: 106288
Effective search space used: 106288
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no441_b02.g1 MSMg01no441_b02.g1 CHROMAT_FILE:
MSMg01no441_b02.g1 PHD_FILE: MSMg01no441_b02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:43 2005
(550 letters)
>mm_chr17_32166191_32167140
Length = 950
Score = 1017 bits (526), Expect = 0.0
Identities = 544/550 (98%)
Strand = Plus / Plus
Query: 1 caggacagcggggctaccaagtgagatcctgtcacaaaaaaaagaaagagaattcacaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggacagcggggctaccaagtgagatcctgtcacaaaaaaaagaaagagaattcacaag 260
Query: 61 caaaagctagataaacggtgctgtagaaggccatctcttcaaccttgccttggccagaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaaagctagataaacggtgctgtagaaggccatctcttcaaccttgccttggccagaaa 320
Query: 121 agtgggggtcgtcagggtaagcccaagttgaaagtttaccgtgacctcacaggaagaaat 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtgggggtcgtcagggtaagcctaagttgaaagtttaccgtgacctcacaggaagaaat 380
Query: 181 gaggtatgcctaatgcctaatatagagctcatgtctgggtagtcagagctactctgggca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaggtatgcctaatgcctaatatagagctcatgtctgggtagtcagagctactctgggca 440
Query: 241 aggcttatttgttataaaagctttgccatcacagtaaggtctagttacgtcttggcctag 300
||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggcttacctgtcagaaaagctttgccatcacagtaaggtctagttacgtcttggcctag 500
Query: 301 caccagtttgctacaggattttatcctacgaataaggagcagctattgaagtggcttaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caccagtttgctacaggattttatcctacgaataaggagcagctattgaagtggcttaat 560
Query: 361 tccagtagtagaatgatagaatcagacaaaagtgaccaggctgggggctagtgagatggc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tccagtagtagaatgatagaatcagacaaaagtgaccaggctgggggctagtgagatggc 620
Query: 421 tcagtggttaagagcactgactgctcttccaaagatcctgagttcaaatcccagcattca 480
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 621 tcagtggttaagagcactgactgctcttccaaagatcctgagttcaaatctcagcattca 680
Query: 481 catggtggctcacaaccatctgtaataagatctgatgccctcttctggggtgtctgaaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 catggtggctcacaaccatctgtaataagatctgatgccctcttctggggtgtctgaaaa 740
Query: 541 cagctacagt 550
||||||||||
Sbjct: 741 cagctacagt 750
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 950
Length adjustment: 10
Effective length of query: 540
Effective length of database: 940
Effective search space: 507600
Effective search space used: 507600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
