ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCAGAGGTATTTCCAGTGACCTAGTTTATTTGGCCTTGATTGGAAGTGCG
TCTCTTTTGGGGCTGAGTCTTAATGTGACATCTTCAAAAGTGGAAGTTGC
AGGTTAATTTAGCTTGCATTGTTAGCGGGGTTGGGAAGTTTAACACTACA
CCATGGACGAGGCTCTGGACTTCGCGGCAGAAAGAAAACTGTTCCAGGAC
CGAGAATCCAGTGCCCCTGCGAACCACACAGACCATTTAGGTTTGCGTTG
CGCTAACCGGGATATGTTTGATGCTTACGATGCCAGTCCGCATTTGTGTG
ATTTGCCCTGAATACTGAAGCGAGTCCGTGGAATAAGGACAAGTGGAGAT
GACGCATCACTGATTACTGAGCTCGCAGCTCCTTCTGATGCAGGGAGGTC
CGGGACTAGAAGTGCTGGTGATTGCTTTGAAAGTAGGGCAAGCCCCAGTC
TGTCTGTCCTGACTGACACGTGGCTCTATAGCTGCGGGGGGCTGGGGCAC
CTCTGTGTGGGGGACACACCTTATGCCTTCACCTCCTTGTGAAAAGGGTG
CGTGGAACATTTGCGGCGATACGACTTCTGCTCTACAAAACACAGTTGGC
ACTTGCTCTGTGCGTTTTGCGGTTTTATATAATCATGCAGCGTGCCGCTT
CCTTGACGATTTCGCGATGGGAAAATAAGGAATCAGTGCGGTTTACTGCT
ACCCACTN

TCTGTGGTAGCCTGCGCCCCTGGTTCTACTTTAGGTGACCTTAAAGTTTC
CGGATTCTGTTGTTTGGGTTTTTTTTTTTTTTTTAGAACACTTAATTTTA
CTAGATGGGGGAGAGCCAGGAGACCTCCCCCCCCCTTCCCCCGCCCCCCC
CTCCCCTTCTTCTCTCCTTTTTCCCCCCCTCCTTTCCCCCCTCCCCTCCC
TTCTCTCCCCTTTTTTCTTTTTCCCCCCTTTCTTCCCTTCTTTTCCCCCC
CTTTCCTTCTCCTTTCTCCTTTTTTTTTTCACCAACCCCCCCCCCCCACC
CTCTTTTTCTCCCCCTCCCTTTTTCTTCCCCCTTTCCCCTTTTTTTTCTC
CCTCTTTCCCCCCTCCCCTCCCCTTTTTCCCCCCCTCTCCCCCTTTCTTC
CCTTCTTCCCCCCCCCTTTTCCCCCCCCCCTCCCTTTCCCTTCTCTTTTT
CCCCTTCTTTTTTTCCCTCCCTTCCTCCCCCCCCCCTTTTCTCCCCCCCT
TTTTTCTTCTTTCCCCTCCCCCCCTTTCTTCCCCCCTCCCCCTTTCCCCC
CCCTTTTTTTTCTTTCCCCCCTCTTTTCCCCTCCCCCCCCCCCCCTCTCT
TCCCCCCCCCCCCCCTTTTTCCCCTTTTCTCTCCTCCCCCCCTCCCCCTC
CCCTTTTTCCTTTTCCCCCCCCCCCCTTCCCTTTCTCCTCCCTTTCTCTT
TCCCTCTCTTTTTCCCCTCCCCCCCCCCCCCCCCTG

Query= MSMg01no441_l19.b1 MSMg01no441_l19.b1 CHROMAT_FILE:
MSMg01no441_l19.b1 PHD_FILE: MSMg01no441_l19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:08:38 2005
         (550 letters)



>mm_chr17_69525754_69526699
          Length = 946

 Score =  932 bits (482), Expect = 0.0
 Identities = 529/546 (96%), Gaps = 4/546 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcagaggtatttccagtgacctagtttatttggccttgattggaagtgcgtctctt 64
           |||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 205 gaattcagaggtaaatccagtgacctagtttatttggccttaattggaagtgcgtctctt 264

                                                                       
Query: 65  ttggggctgagtcttaatgtgacatcttcaaaagtggaagttgcaggttaatttagcttg 124
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 265 ttggggctgagtcttaatgtgacatcttcaaaagtggaagttgcagattaatttaacttg 324

                                                                       
Query: 125 cattgttagcggggttgggaagtttaacactacaccatggacgaggctctggacttcgcg 184
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 325 cattgttagcggggttgggaagtttaacactacaccatggacgaggctctggactttgcg 384

                                                                       
Query: 185 gcagaaagaaaactgttccaggaccgagaatccagtgcccctgcgaaccacacagaccat 244
           |||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||
Sbjct: 385 gcagaaagaaaactgttccaggacggagaatccggtgctcctgcgaaccacacagaccat 444

                                                                       
Query: 245 ttaggtttgcgttgcgctaaccgggatatgtttgatgcttacgatgccagtccgcatttg 304
           |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 445 ttaggtttgcgttgcgctgaccgggatatgtgtgatgcttacgatgccagtccgcatttg 504

                                                                       
Query: 305 tgtgatttgccctgaatactgaagcgagtccgtggaataaggacaagtggagatgacgca 364
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgtgatttgccctgaaaactgaagcgagtccgtggaataaggacaagtggagatgacgca 564

                                                                       
Query: 365 tcactgattactgagctcgcagctccttctgatgcagggaggtccgggactagaagtgct 424
           |||||||||||||||||||||||||||| |||||||||||||   ||| |||||||||||
Sbjct: 565 tcactgattactgagctcgcagctccttttgatgcagggagg---ggg-ctagaagtgct 620

                                                                       
Query: 425 ggtgattgctttgaaagtagggcaagccccagtctgtctgtcctgactgacacgtggctc 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggtgattgctttgaaagtagggcaagccccagtctgtctgtcctgactgacacgtggctc 680

                                                                       
Query: 485 tatagctgcggggggctggggcacctctgtgtgggggacacaccttatgccttcacctcc 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tatagctgcggggggctggggcacctctgtgtgggggacacaccttatgccttcacctcc 740

                 
Query: 545 ttgtga 550
           ||||||
Sbjct: 741 ttgtga 746


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 946
Length adjustment: 10
Effective length of query: 540
Effective length of database: 936
Effective search space:   505440
Effective search space used:   505440
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)