Query= MSMg01no445_i18.b1 MSMg01no445_i18.b1 CHROMAT_FILE:
MSMg01no445_i18.b1 PHD_FILE: MSMg01no445_i18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:13:47 2005
(530 letters)
>mm_chr17_41067685_41068613
Length = 929
Score = 895 bits (463), Expect = 0.0
Identities = 522/567 (92%), Gaps = 41/567 (7%)
Strand = Plus / Plus
Query: 1 ctgtttgtgttttatataacatggtagttttcacagaaagtgtaaatcatgaacatacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 ctgtttgtgttttatataacatggtagttttcacagaaagtgtaaatcatgaacatacct 226
Query: 61 tgggaagaatcaatattaacagaacaatttaaaagttttagactacaacccacacagact 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 227 tgggaagaatcaatattaacggaacaatttaaaagttttagactacaacccacacagact 286
Query: 121 tgacttttactacttcactgatagaatcccaagtttctacaatgtagaaaatctt----- 175
||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 tgatttttactacttcactgatagaatcccaagtttctacaatgtagaaaatctttgtgt 346
Query: 176 -----------------------------tgtgtgtgtgtgtaatggtgatcatgaatca 206
|||||||||||||||||||||||||||||||
Sbjct: 347 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtaatggtgatcatgaatca 406
Query: 207 atgaatatcttttctgaagttgaagaacactctattgcctttttt---atactgtcatgg 263
||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 407 atgaatatcttttctgaagttgaagaacactctattgcc----ttaaaatactgtcatgg 462
Query: 264 tataccaatcatgaatgaatatcttttctgaaatggaagaatacttccttaaaatagtca 323
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 tatgccaatcatgaatgaatatcttttctgaaatggaagaatacttccttaaaatagtca 522
Query: 324 tggtataaatttggtatgtctgcccttggcatatgtgtggaatgtacggtcttcactttg 383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 tggtataaatttggtatgtctgcccttggcatatgtgtggaatgtacggtcttcactttg 582
Query: 384 gaaattctaggagtttgtaactggctgggtgatacacaggggactagggtatgcttttaa 443
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 gaaattctaggagttagtaactggctgggtgatacacaggggactagggtatgcttttaa 642
Query: 444 gtgacacctggtccctggtgccagtcttgtgttttgcttcctgaaaagcattgctcccac 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 gtgacacctggtccctggtgccagtcttgtgttttgcttcctgaaaagcattgctcccac 702
Query: 504 tgccatgatgttctgcctcccaagggc 530
|||||||||||||||||||||||||||
Sbjct: 703 tgccatgatgttctgcctcccaagggc 729
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 530
Length of database: 929
Length adjustment: 10
Effective length of query: 520
Effective length of database: 919
Effective search space: 477880
Effective search space used: 477880
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no445_i18.g1 MSMg01no445_i18.g1 CHROMAT_FILE:
MSMg01no445_i18.g1 PHD_FILE: MSMg01no445_i18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:13:47 2005
(527 letters)
>mm_chr17_41228806_41229732
Length = 927
Score = 553 bits (286), Expect = e-161
Identities = 331/346 (95%)
Strand = Plus / Minus
Query: 182 tggacagcctctttaatagatgatacttgaaaactagacacaggtagattattgaaatta 241
|||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 927 tggacaacctctttaatagatgatacttgaaaactagacacaggtagattatttaaatta 868
Query: 242 cattcttgtttcttactatataatattaacccaaaatttgataaagatatcaatgtaatc 301
||||||||||||||||||| ||||||| |||| |||||||||||| |||| |||||||||
Sbjct: 867 cattcttgtttcttactatgtaatattgaccccaaatttgataaatatattaatgtaatc 808
Query: 302 aatataatttaatgcaacattatctactaaaggaagtcttaatgaaaatgcttcaaaatg 361
||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 807 aatataacttaatgcaacattatctactaaaggaagtcttaatgaaaatatttcaaaatg 748
Query: 362 tttgtataggcagcaattttcaaactatgaaattgtacatagctgagataataatcagta 421
||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 747 tttgtataggcagcaattttcaaactatgaaattgtacatagcagagaaaataatcagta 688
Query: 422 cagggcagagataatatataaagttagaaaatgtatattatccactgggggaaaacattt 481
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 cagggcaaaaataatatataaagttagaaaatgtatattatccactgggggaaaacattt 628
Query: 482 aaactagaatatctaaataattttagaaaaatcaataaataaaaat 527
|||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 627 aaactagaatatctaaataactttagaaaaatcaataaataaaaat 582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 927
Length adjustment: 10
Effective length of query: 517
Effective length of database: 917
Effective search space: 474089
Effective search space used: 474089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
