Query= MSMg01no448_j21.b1 MSMg01no448_j21.b1 CHROMAT_FILE:
MSMg01no448_j21.b1 PHD_FILE: MSMg01no448_j21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:57 2005
(435 letters)
>mm_chr17_9875755_9876589
Length = 835
Score = 741 bits (383), Expect = 0.0
Identities = 398/403 (98%)
Strand = Plus / Minus
Query: 2 tttttttttcagacaccagcattccaaacacacaacaatactatttgccaagcaaaagtc 61
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 403 tttttttttcagacaccagcatcccaaacacacaacaatactatttgccaagcaaaagtc 344
Query: 62 ttctatttttccaacacaatggaccattttgaagtgttgccaatggggttatgatctaca 121
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 ctctatttttccaacacaatggaccattttgaagtgttgccaatggggttatgatctaca 284
Query: 122 ccacaaaggaatgcaaacccattcttgaccacatgttgctaaagatggctcattaaatat 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ccacaaaggaatgcaaacccattcttgaccacatgttgctaaagatggctcattaaatat 224
Query: 182 gggttgttgataaatactactgcttcttctccttctcctcatgctcctcctcctcaccct 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 gggttgttgataaatactactgcttcttctccttctcctcatgctcctcctcctcaccct 164
Query: 242 cctcttttctcttctgcctcccttcccatccccttcctccctctcttattttttctcatc 301
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 163 cctcttttctcttctgcctcccttcccatccccttcctccctctcttattccttctcatc 104
Query: 302 ctcctgttatcagggaagtccatatgcttggcatgctttcttacctattggtccaaatag 361
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 103 ctcctgttatcagggaagtccatatgcttgacatgctttcttacctattggtccaaatag 44
Query: 362 cttccagaggaagctcctgtattttgccttggttactctgttt 404
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 cttccagaggaagctcctgtattttgccttggttactctgttt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 835
Length adjustment: 9
Effective length of query: 426
Effective length of database: 826
Effective search space: 351876
Effective search space used: 351876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no448_j21.g1 MSMg01no448_j21.g1 CHROMAT_FILE:
MSMg01no448_j21.g1 PHD_FILE: MSMg01no448_j21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:57 2005
(508 letters)
>mm_chr17_9723851_9724758
Length = 908
Score = 967 bits (500), Expect = 0.0
Identities = 506/508 (99%)
Strand = Plus / Plus
Query: 1 actgcaggagcactgggaggactgtgggaggagctctcggaggactgtgggaggactgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actgcaggagcactgggaggactgtgggaggagctctcggaggactgtgggaggactgtg 260
Query: 61 ggaggagttctggtaggcttgtctcaggcaatgatcagaaacttcaggcatgagaaaaga 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggaggagctctggtaggcttgtctcaggcaatgatcagaaacttcaggcatgagaaaaga 320
Query: 121 ccaaagttccagccagactgttatgccaaggagactcacccactaaaggaagcacaggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccaaagttccagccagactgttatgccaaggagactcacccactaaaggaagcacaggag 380
Query: 181 aatcacgcgacataagtctccacacacacaggagttagcctggtggacccttgagatgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatcacgcgacataagtctccacacacacaggagttagcctggtggacccttgagatgga 440
Query: 241 taaagtttctatgccatagagagcagagactggttagcctttggaaggaggagaagtgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taaagtttctatgccatagagagcagagactggttagcctttggaaggaggagaagtgag 500
Query: 301 ctgataaagcccaagtgcacaggggatggaaagggtggaccatcgcagcatcccaggctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctgataaagcccaagtgcacaggggatggaaagggtggaccatcgcagcatcccaggctc 560
Query: 361 agcaaatgccctgcaccgggccatttacaacagtgatgtgtactgacaaatgaccttggg 420
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 561 agcaaatgccctgcaccgggccatttacaacagtgatgtgtactgacaaacgaccttggg 620
Query: 421 tgcatgggaaccttcctcatgcacagaggctggtagaaagtacggactggatgggctaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgcatgggaaccttcctcatgcacagaggctggtagaaagtacggactggatgggctaag 680
Query: 481 gagaaagggcttttcttggcgcatagta 508
||||||||||||||||||||||||||||
Sbjct: 681 gagaaagggcttttcttggcgcatagta 708
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 908
Length adjustment: 10
Effective length of query: 498
Effective length of database: 898
Effective search space: 447204
Effective search space used: 447204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
