Query= MSMg01no449_l05.b1 MSMg01no449_l05.b1 CHROMAT_FILE:
MSMg01no449_l05.b1 PHD_FILE: MSMg01no449_l05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:23 2005
(310 letters)
>mm_chr17_49811261_49811968
Length = 708
Score = 569 bits (294), Expect = e-166
Identities = 306/310 (98%), Gaps = 2/310 (0%)
Strand = Plus / Plus
Query: 1 attttgagtcgagaagactagaagaaattgctgagatctgcataattctaattgccatcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attttgagtcgagaagactagaagaaattgctgagatctgcataattctaattgccatcc 260
Query: 61 ataaagcagcaattatccattagttcagctcttctctcagtggcccgagcgcgccaagtg 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 ataaagcagcaattatccattagttcagctcttctctcagtggctcgagcgcgccaagtg 320
Query: 121 tgtgtgtgccagaaactgtggaggagggaggctgagaggagggtgtgcctcatcctgagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtgtgtgccagaaactgtggaggagggaggctgagaggagggtgtgcctcatcctgagt 380
Query: 181 ctttctcctcacctctgcatttattcctgacaccacctgtcttgccacgcacatacatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctttctcctcacctctgcatttattcctgacaccacctgtcttgccacgcacatacatgt 440
Query: 241 cacaagcaggggctattatttccaatagtttttgttgctgtnggaccaaaagtggaaggt 300
|||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 441 cacaagcaggggctataatttccaatagtttttgttgctgt-ggaccaaa-gtggaaggt 498
Query: 301 tgtcatctta 310
||||||||||
Sbjct: 499 tgtcatctta 508
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 310
Length of database: 708
Length adjustment: 9
Effective length of query: 301
Effective length of database: 699
Effective search space: 210399
Effective search space used: 210399
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no449_l05.g1 MSMg01no449_l05.g1 CHROMAT_FILE:
MSMg01no449_l05.g1 PHD_FILE: MSMg01no449_l05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:23 2005
(248 letters)
>mm_chr17_50017096_50017741
Length = 646
Score = 398 bits (206), Expect = e-115
Identities = 234/244 (95%), Gaps = 2/244 (0%)
Strand = Plus / Minus
Query: 1 aacttggaacctctgaggtgccatgtcatctgttgtcatgtaatttcccttagattctct 60
||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 442 aacttggaacctctgagatgccatgtcatctgttgtcatgtaatttcctttagattctct 383
Query: 61 gaaattccaaggaattgacatctctcctacgcgtttctgagagaacagatgttctataat 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 382 gaaattccaaggaattgacatctctcccacgcgtttctgagagaacagatgttctataat 323
Query: 121 ttatccaagccctcacgcgtgtccacatacagtggcatgcatcccaaagacaactgcatt 180
| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 322 tgatccaagccctcacgcgtgtccacatccagtggcatgcatcccaaagacaactgcagt 263
Query: 181 tttggaggtcacgctctgttgctgaggagccggaaagagcgagagagccattagttcatg 240
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 262 cgtggaggtcacgctctgttgctgaggagccggaaagagc--gagagccattagttcatg 205
Query: 241 ccat 244
||||
Sbjct: 204 ccat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 646
Length adjustment: 9
Effective length of query: 239
Effective length of database: 637
Effective search space: 152243
Effective search space used: 152243
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
