TGGAGAGATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCAACATGGTTTTCCATGCTGAAAAAAGAAGGTGCTACAG
TATCTGTTGGTAGTCACAAGGGAATTAATAAATAATACAAGCAAAGTAAC
AGCATTATCCTAGTCACATGTTATAGTCCATCCAAACTCACAGTAAAGTG
TGGAATATTTCTAGAGAATGCCTGTGCTGGTATTTTTTCTCATTGTGTGT
TCACTGAACTAGAAATGATCTGTTATAGATCCCCAGCAATGAGATCTTGT
TCCAGAGTCCAGAGGTCCTTTCTGGAGAAATATGAAGGGATCAGAGATTC
TTCTCCATTTGAGAAAGCCATGCGAGTAGACACTGGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGCATTACTAAGATTAAGCCTAAGTCCATA
TGAAATAATTAATGCATTATATCAACTTTTAATGCTAGGATAAGGCTCAT
TTTGAAATAGAAAATACTGTTAGAGAAGAGACCTAGGTTTAACTCTTTCA
AATAAGGCCAGATATTCAGGACCTTGAACAACAGGTGGGCCTTCAGAGTC
CTGCATGTGTGAGGGCTCTCTATACCTCCTACTTTAAGAGAATCAAAATT
GATTTTCTGACTGTAGGGTTTTCAGAAGTCAGTAAACAATGAGGAATCTT
CAAGAATTCTTTATAGGAAGAGTAGAGGACAGGAGA

NNNTTTCCCGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCCTGAGGAACATGGGT
TCAATCCCCAGGACTTACAAGGTGAGATGAAGGGACAGACTCTTCCAAAT
TCTCCTCTGATATCCTCATGCATCATACGTGTGTATACACACATGAAAGA
AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA
GAAAGAGAGAAAGAAAGAAAGGAAGAAAGGAAGGAAGGAAGAAAGGAAGG
AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA
GAAAGAAAGAAAGAAAGAAAGAATTTTGCATTAAAATTTTATTCATCCTT
CAAACTTGAGAGGAAGAGGACATGCAATTGCTCCTGTTCCTGCTATGTAC
TGGGGCTACTTGATTGGTCTAACACAGCATTGGCAGGGGTGGCAAGACAT
GGTTCCTGCCTCTGAAACAGGGCCAGCAGGCTTTGGCTTCCATGAATGTT
GATGTCTGTTGTGGGTGTAAGGCTTGTTTGTGTAATAAGGTACATATTTC
CACATTCCTGTGAGGAATATCCTCCCTGTCAATGTTTATATGATATAATT
AGAAACAGCATACATCCTCTAATAAAAAAAAAGTTTTTGGAAAAAGAAAA
AAGAAAGAAAAGAAAAAGTAAACCTTTGCTAATTAATTTAAA

Query= MSMg01no451_i14.b1 MSMg01no451_i14.b1 CHROMAT_FILE:
MSMg01no451_i14.b1 PHD_FILE: MSMg01no451_i14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:49 2005
         (684 letters)



>mm_chr17_58672479_58673561
          Length = 1083

 Score = 1156 bits (598), Expect = 0.0
 Identities = 652/680 (95%), Gaps = 17/680 (2%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcaacatggttttccatgctgaaaaaagaaggtgctacagtatctgttggtagtca 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaacatggttttccatgctgaaaaaagaaggtgctacagtatctgttggtagtca 264

                                                                       
Query: 65  caagggaattaataaataatacaagcaaagtaacagcattatcctagtcacatgttatag 124
           ||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||
Sbjct: 265 caagggaattaataaataatacaagaaaagtaacagcattctcctagtcacatg-tatag 323

                                                                       
Query: 125 tccatccaaactcacagtaaagtgtggaatatttctagagaatgcctgtgctggtatttt 184
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tccatctaaactcacagtaaagtgtggaatatttctagagaatgcctgtgctggtatttt 383

                                                                       
Query: 185 ttctcattgtgtgttcactgaactagaaatgatctgttatagatccccagcaatgagatc 244
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 384 ttctcattgtgtgttcactgaactagaaatgatctgttatatatccccagcaatgagatc 443

                                                                       
Query: 245 ttgttccagagtccagaggtcctttctggagaaatatgaagggatcagagattcttctcc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttgttccagagtccagaggtcctttctggagaaatatgaagggatcagagattcttctcc 503

                                                                       
Query: 305 atttgagaaagccatgcgagtagacactggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 364
           ||||||||||||| |||||||||||||||                |||||||||||||||
Sbjct: 504 atttgagaaagccgtgcgagtagacactg----------------gtgtgtgtgtgtgtg 547

                                                                       
Query: 365 tgtgtgcattactaagattaagcctaagtccatatgaaataattaatgcattatatcaac 424
           ||| |||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 548 tgtatgcattgctaagattaagcctaggtccatatgaaataaataatgcattatatcaac 607

                                                                       
Query: 425 ttttaatgctaggataaggctcattttgaaatagaaaatactgttagagaagagacctag 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 ttttaatgctaggataaggctcattttgaaatagaaaatactgttagagaagagacctag 667

                                                                       
Query: 485 gtttaactctttcaaataaggccagatattcaggaccttgaacaacaggtgggccttcag 544
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 668 gtttaactctttcaaataaggccagctattcaggaccttgaacaacaggtgggccttcag 727

                                                                       
Query: 545 agtcctgcatgtgtgagggctctctatacctcctactttaagagaatcaaaattgatttt 604
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 728 agtcctgcatgtgtgagggctctctatacctcctactttaggagaatcaaaattgatttt 787

                                                                       
Query: 605 ctgactgtagggttttcagaagtcagtaaacaatgaggaatcttcaagaattctttatag 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 ctgactgtagggttttcagaagtcagtaaacaatgaggaatcttcaagaattctttatag 847

                               
Query: 665 gaagagtagaggacaggaga 684
           ||||||||||||||||||||
Sbjct: 848 gaagagtagaggacaggaga 867


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 684
Length of database: 1083
Length adjustment: 10
Effective length of query: 674
Effective length of database: 1073
Effective search space:   723202
Effective search space used:   723202
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)