Query= MSMg01no451_n23.b1 MSMg01no451_n23.b1 CHROMAT_FILE:
MSMg01no451_n23.b1 PHD_FILE: MSMg01no451_n23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:16 2005
(633 letters)
>mm_chr17_9108828_9109863
Length = 1036
Score = 1178 bits (609), Expect = 0.0
Identities = 626/633 (98%), Gaps = 3/633 (0%)
Strand = Plus / Minus
Query: 4 ggaattccaggtttcagcctcagtttggaatgctgtccttgtggctttgagcagtgccca 63
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 ggaattccaggttagagcctcagtttggaatgctgtccttgtggctttgagcagtgccca 777
Query: 64 ccactgagctgctgatgggtgttttacatagtctaaagaccaagctccctttgaatggct 123
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 ccactgagctgctgctgggtgttttacatagtctaaagaccaagctccctttgaatggct 717
Query: 124 ggataagggatactgagaaacagggagctggcttggataacaaagtttaagttatttgca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 ggataagggatactgagaaacagggagctggcttggataacaaagtttaagttatttgca 657
Query: 184 agcactgaatcatcagtagaaaggttcacagcagaggacacaggtcttcaggcaggagag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 agcactgaatcatcagtagaaaggttcacagcagaggacacaggtcttcaggcaggagag 597
Query: 244 ggcctcttccttcaatacatgtctgttcatcatctagatacctaggagcctgtgcctggg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 ggcctcttccttcaatacatgtctgttcatcatctagatacctaggagcctgtgcctggg 537
Query: 304 cacccagccccatcattgggaatgtgtgcagtccatcgatatagaccaatcaggaaacca 363
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 536 cacccagccccatcattgggaatgtgtgcagtccattgatatagaccaatcaggaaacca 477
Query: 364 gtagtgtcagagaacaaataggcttgctaactacaaatgtgttttt---ttttttcagaa 420
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 476 gtagtgtcagagaacaaataggcttgctaactacaaatgtgtttttgttttttttcagaa 417
Query: 421 aggaaaaccacctccatagaagctccatcttaatgatctttaaaagcctaagcaagaatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 aggaaaaccacctccatagaagctccatcttaatgatctttaaaagcctaagcaagaatg 357
Query: 481 gggcatagaaggaagagaatctcctcaggggttcttagcgcttaatgggtgcctctttca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 gggcatagaaggaagagaatctcctcaggggttcttagcgcttaatgggtgcctctttca 297
Query: 541 cagtaaatactcccactaaatattttataagtctttataaatgtgtggatatttgtgttt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 cagtaaatactcccactaaatattttataagtctttataaatgtgtggatatttgtgttt 237
Query: 601 tgtgaccactctcaatgtgtccctgatgtgaga 633
|||||||||||||||||||||||||||||||||
Sbjct: 236 tgtgaccactctcaatgtgtccctgatgtgaga 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1036
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1026
Effective search space: 639198
Effective search space used: 639198
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no451_n23.g1 MSMg01no451_n23.g1 CHROMAT_FILE:
MSMg01no451_n23.g1 PHD_FILE: MSMg01no451_n23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:16 2005
(655 letters)
>mm_chr17_8964536_8965590
Length = 1055
Score = 1236 bits (639), Expect = 0.0
Identities = 651/655 (99%)
Strand = Plus / Plus
Query: 1 tccagatcagcccgtcttagctgtctcttaccatgttggggttacgggcacacacagcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccagatcagcccgtcttagctgtctcttaccatgttggggttacgggcacacacagcca 260
Query: 61 ggacaggcgtctatattggtgctggggatttaaactgaggtcctcagaattgcagagcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggacaggcgtctatattggtgctggggatttaaactgaggtcctcagaattgcagagcaa 320
Query: 121 aggggaaggagaagaggctaggtggggacatggctcagtggttggagtacttccttgcga 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 321 aggggaaggagaagaggctaggtggggacatggctcagtggtttgagtacttccttgcga 380
Query: 181 ttgtgaaggctggagtttaatccccatttccttcctgatcttgctttccgtcggttctgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgtgaaggctggagtttaatccccatttccttcctgatcttgctttccgtcggttctgc 440
Query: 241 caacatatttataattgctagtgtggtctattccacattgatccagcattcatgaaaccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caacatatttataattgctagtgtggtctattccacattgatccagcattcatgaaaccc 500
Query: 301 ctcgaaaaagactgtgccatctgcttgctgtttcaccttccccatcaggatgtctcgctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctcgaaaaagactgtgccatctgcttgctgtttcaccttccccatcaggatgtctcgctt 560
Query: 361 ccctgtccctttgtatgtgaattattctttgttggaaatgggacattttggttaatgtag 420
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 561 ccctgtccctttgtatgtgaattattctttgttggaaatgggacattttagttaatgtag 620
Query: 421 cagccctaagtactggtcctctctcttcccatggcctctgtgattactgttcactgactt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cagccctaagtactggtcctctctcttcccatggcctctgtgattactgttcactgactt 680
Query: 481 attcagctaattactggctgtagtattttaagtgagatctgtcctcccctgctcgcacac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 attcagctaattactggctgtagtattttaagtgagatctgtcctcccctgctcgcacac 740
Query: 541 tgtgttatagttctgaagctgctcactggggagggattgattctggtacgctactctgat 600
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 741 tgtgttatagttctgaagctgctcactggggagggattgattctggcacgctactctgat 800
Query: 601 aacagtggtgtggtgggacctctcctttctttgcacatggccacagagtcctttt 655
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 aacattggtgtggtgggacctctcctttctttgcacatggccacagagtcctttt 855
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1055
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1045
Effective search space: 674025
Effective search space used: 674025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
