NNNTTATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCATATATGTTCCAACAGTATATGCACCCAATGAATTAATA
TCTCAGGTAAATAAGGATCTCAAGTAATTCAAAAGCAAGCAAGCAAATAA
CCCAATTTAAAAGACAAAGGCCTTAAATGGATGGGCCTTGAGAGAGGCCT
GAGTGAGGTACTCAGTCACAGAGGAACACACATGGTATGTACTGATAAGT
GGATACTAGCCCAAAAGTTCGGAATACCCAACATTCAATTCACAGACCAT
ATGAAACCTAAAAAGAAGGAAGACCAAAATGTGGATGCTTCAGTGCTTCT
TAGAAGGGTGAACAAAATACTCACAGGAGGAAATATGGAGACAAAGTGTG
GAGCAGAGACTGAAAGAAAGGCCATCCAGAGACTGCCCTGGGGATCTATC
CCATATATAGCCACCAAACCTGGATGCTTTTGTGGATACCTGGAAGTGCT
TGCTGACAGGAGCCTGATATGGCTGTCTCCTGAGAGGCTCTGCCAGTGCC
TAACAAATACAGAGGTGGATGCTCACAGCCAACCATTGGACTGAGCGCTG
GGGTCACCATGGAGGAGTTGGAGAAGGGACTGAAGTAGCTGAGGGGCTTT
GCAGCACCATGGAGGGAGCAACAGTGTCACCCAGCCAGACTGCCCCGACC
CCCGACCCCCCACCCCCCAGAGCTTCCAGGNACTGGACCACCAACCA

TTTTCCGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTACAGCGAGAAAGTAGGACA
AGCAGTATCCACGCTGAGACCTATCCTATTTTGAAACCATTGTCACATCT
CAGGGGGATTTTTTTTTTTTTTGCCCAGGGAGCTAAGGGTTAATCAGGTC
TGACTGGAAGAGCAGACTGGCCCTATTAAAAGGGACTTTGCTGTCTTGAC
TCACTGGCTGGTCTGATTCTTCCAGAAGGTCGGCGTGTCTTCCCCCTTGT
CCTTGATGTTGAGGTAGAAACCACTGCCCATCCCTCTGTGACGTTCTCAA
TGCCTTGGAAACAGTGCATGCGCCTGGGTTCAGCCATCTAGACTTTGTGG
GGTCCAAGGCCCTGACCTGCTGATAACCTAGTGCTCAACCTGGCTATATG
CCAGTGAGCCTGGATGAGTGTTCTCTGAATCAGCACCCTTCTCCCTAGAT
CTACAAGGACCAGTCTCTCTATTTGTTTGAAAAAGAACCTCCCCCTTGTT
TCTAAGGCCCACCGCAGAGCCTCTGTGCTTCCATCTTCCGATTCCTTCCA
CACCGCTCCTTGTGCCTGTGGATCCTCTTCTGTGTTTACACCTTTGCTCA
CTTTGATCAGCTGAAGTGTGGTGTCTCCTCTGCCCCCTCTTTCTTTTGCA
CTCACCCAATCATAAAAAGTGAATCTCGGTCCTGGGCTCACCC

Query= MSMg01no452_d16.g1 MSMg01no452_d16.g1 CHROMAT_FILE:
MSMg01no452_d16.g1 PHD_FILE: MSMg01no452_d16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:44 2005
         (533 letters)



>mm_chr17_65996248_65997180
          Length = 933

 Score =  984 bits (509), Expect = 0.0
 Identities = 529/539 (98%), Gaps = 6/539 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   tacagcgagaaagtaggacaagcagtatccacgctgagacctatcctattttgaaaccat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 tacagcgagaaagtaggacaagcagtatccacgctgagacctatcctattttgaaaccat 758

                                                                       
Query: 61  tgtcacatctcaggggga------ttttttttttttttgcccagggagctaagggttaat 114
           ||||||||||||||||||      ||||||||||||||||||||||||||||||||||||
Sbjct: 757 tgtcacatctcagggggattttttttttttttttttttgcccagggagctaagggttaat 698

                                                                       
Query: 115 caggtctgactggaagagcagactggccctattaaaagggactttgctgtcttgactcac 174
           |||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 697 caggtctgactggaattgcagactggccctattaaaagggactttgctggcttgactcac 638

                                                                       
Query: 175 tggctggtctgattcttccagaaggtcggcgtgtcttcccccttgtccttgatgttgagg 234
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 tggctggtctgattcttccagaaggtcggcgtgtcttcccccttgtccttgatgttgagg 578

                                                                       
Query: 235 tagaaaccactgcccatccctctgtgacgttctcaatgccttggaaacagtgcatgcgcc 294
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 tagaaaccactgcccatccctctgtgacgttctcaatgccttggaaacagtgcatgcgcc 518

                                                                       
Query: 295 tgggttcagccatctagactttgtggggtccaaggccctgacctgctgataacctagtgc 354
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 517 tgggttcagccatctagactttgtggggtccgaggccctgacctgctgataacctagtgc 458

                                                                       
Query: 355 tcaacctggctatatgccagtgagcctggatgagtgttctctgaatcagcacccttctcc 414
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 tcaacctggctatatgccagtgagcctggatgagtgttctctgaatcagcacccttctcc 398

                                                                       
Query: 415 ctagatctacaaggaccagtctctctatttgtttgaaaaagaacctcccccttgtttcta 474
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 ctagatctacaaggaccagtctctctatttgtttgaaaaagaacctcccccttgtttcta 338

                                                                      
Query: 475 aggcccaccgcagagcctctgtgcttccatcttccgattccttccacaccgctccttgt 533
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 aggcccaccgcagagcctctgtgcttccatcttccgattccttccacaccgctccttgt 279


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 533
Length of database: 933
Length adjustment: 10
Effective length of query: 523
Effective length of database: 923
Effective search space:   482729
Effective search space used:   482729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)