Query= MSMg01no453_g23.b1 MSMg01no453_g23.b1 CHROMAT_FILE:
MSMg01no453_g23.b1 PHD_FILE: MSMg01no453_g23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:18 2005
(307 letters)
>mm_chr17_30980509_30981215
Length = 707
Score = 563 bits (291), Expect = e-165
Identities = 303/307 (98%)
Strand = Plus / Plus
Query: 1 aaatggatccatggcctccttgatactcccctactgctacctcttctcttctttgatggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaatggatccatggcctccttgatactcccctactgctacctcttctcttctttgatggt 260
Query: 61 ttccagggcatttagagcacaatggaatctattgccacctctctaaccttatctagagca 120
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttccagggcacttagagcacaatggaatctattgccacctctctaaccttatctagagca 320
Query: 121 tcctcagtagagcaaccctatctagagcatcctcaatagagcaaccttatctagagcagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcctcagtagagcaaccctatctagagcatcctcaatagagcaaccttatctagagcagc 380
Query: 181 cccaatacagcaaccttgtctagagtcttaaaacatgttagagacccagacctggtgggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cccaatacagcaaccttgtctagagtcttaaaacatgttagagacccagacctggtgggt 440
Query: 241 agatccagggatctactgtgtggatactggcctaaatcatggatggtgatatgtgggaca 300
||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||
Sbjct: 441 agatccagggatctactgtgtggatactgacctaaatcagggatggtgataggtgggaca 500
Query: 301 aagtggc 307
|||||||
Sbjct: 501 aagtggc 507
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 307
Length of database: 707
Length adjustment: 9
Effective length of query: 298
Effective length of database: 698
Effective search space: 208004
Effective search space used: 208004
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no453_g23.g1 MSMg01no453_g23.g1 CHROMAT_FILE:
MSMg01no453_g23.g1 PHD_FILE: MSMg01no453_g23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:18 2005
(435 letters)
>mm_chr17_31152913_31153747
Length = 835
Score = 584 bits (302), Expect = e-171
Identities = 323/330 (97%), Gaps = 2/330 (0%)
Strand = Plus / Minus
Query: 1 ccctcaactcagctttgcactgttgcctgccactttcattggcaaattgag-ggaaaatg 59
||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 329 ccctcaactcagctttgcactgttgcctgccactttcattggcaaattgagcgg-aaatg 271
Query: 60 gcgtagcctaatttactgtggctgtctgagcctaggctttgacgcttatcacaccagcgc 119
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 270 gcgtagcctaatttactgtggctgtctgagcctaggctttgacgctaatcacaccagcgc 211
Query: 120 gtgatgaacgtttgtccacctgggcctgggtgatgccactgcggcgggattatgaacaca 179
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 210 gtgatgaacgtttgtccacctgggcctgggtgatgccactgccgtgggattatgaacaca 151
Query: 180 cgtggttctacatgtctcaggctctgggtcaggctgcatatatttctaatctttggggcc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 cgtggttctacatgtctcaggctctgggtcaggctgcatatatttctaatctttggggcc 91
Query: 240 tgggctctgagaagccgaggagagacattcaagtatcattaaccaggtgaccgattgcca 299
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 90 tgggctctgagaagccgaggagagacattcaagtatcattagccaggtgaccgattgcca 31
Query: 300 gtaataaccccggatgccgaggcttgagtg 329
||||||||||| ||||||||||||||||||
Sbjct: 30 gtaataaccccagatgccgaggcttgagtg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 835
Length adjustment: 9
Effective length of query: 426
Effective length of database: 826
Effective search space: 351876
Effective search space used: 351876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
