Query= MSMg01no453_l04.b1 MSMg01no453_l04.b1 CHROMAT_FILE:
MSMg01no453_l04.b1 PHD_FILE: MSMg01no453_l04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:39 2005
(660 letters)
>mm_chr17_27743908_27744967
Length = 1060
Score = 1214 bits (628), Expect = 0.0
Identities = 646/652 (99%), Gaps = 1/652 (0%)
Strand = Plus / Minus
Query: 4 ggaattctccaatgagacaagactggatagtctgggagccctagctatctcctcagttct 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 924 ggaattctccaatgagacaagactggatagtctgggagccctagctatctcctcagttct 865
Query: 64 gcaattacaaacactgactactgtatagttttaatttttaattttttaagacttagtgtt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 gcaattacaaacactgactactgtatagttttaatttttaattttttaagacttagtgtt 805
Query: 124 ttgcctgcagatatatctgtgcaccacgtgcataccaggtgcctttgaaggccagaaaac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 ttgcctgcagatatatctgtgcaccacgtgcataccaggtgcctttgaaggccagaaaac 745
Query: 184 ggcgttggatcccctagaagtggagttacagacagttagttgtcagctgtcatgtgggtg 243
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 744 ggcgttggatcccctagaagtggagttacagaca-ttagttgtcagctgtcatgtgggtg 686
Query: 244 ctcttcactgctgagctgtctctccagcctagccgtgctttttctccccttttccttttc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ctcttcactgctgagctgtctctccagcctagccgtgctttttctccccttttccttttc 626
Query: 304 tgtttttctttttcgtgtgtgtgtgtgagagagagagagagagtgcgcttaaattcaggt 363
||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||
Sbjct: 625 tgtttttctttttcgtgtgtgtgtgtgtgtgagagagagagagaacgcttaaattcaggt 566
Query: 364 cttcaggcttacttggcaaggtctgcatccagttaagccattttccagcctaatatagat 423
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 565 cttcaggcttacttggcaaggtctgcatccagttaagccattttccagcccaatatagat 506
Query: 424 atattagcatattaagatttcttttggaagtcttagacagtcatagattattcaacaact 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atattagcatattaagatttcttttggaagtcttagacagtcatagattattcaacaact 446
Query: 484 ttttgttttgttttgagatagccctggctatcctgggcttctttgtagtccatgctggtc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttttgttttgttttgagatagccctggctatcctgggcttctttgtagtccatgctggtc 386
Query: 544 tagaactcacagagctacttctgcctcccgagtgctaggattaaaggcctgcgtgcccta 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tagaactcacagagctacttctgcctcccgagtgctaggattaaaggcctgcgtgcccta 326
Query: 604 ctgcaccaggcagtaagatttttttaagcattggcttctttttttttttttt 655
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctgcaccaggcagtaagatttttttaagcattggcttctttttttttttttt 274
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1060
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1050
Effective search space: 682500
Effective search space used: 682500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no453_l04.g1 MSMg01no453_l04.g1 CHROMAT_FILE:
MSMg01no453_l04.g1 PHD_FILE: MSMg01no453_l04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:39 2005
(645 letters)
>mm_chr17_27566812_27567856
Length = 1045
Score = 1239 bits (641), Expect = 0.0
Identities = 644/645 (99%)
Strand = Plus / Plus
Query: 1 tgggcccacactggaaggcatagggttgaggacctggctcccctctacaactacactttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgggcccacactggaaggcatagggttgaggacctggctcccctctacaactacactttc 260
Query: 61 ttttctgaccttgtgatcagcctgaacaggacagagggacaatgtctgtggggtcatcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttttctgaccttgtgatcagcctgaacaggacagagggacaatgtctgtggggtcatcaa 320
Query: 121 actctgaggccccagctggctgatgagtgtaatcgagattgtaataaccttcctgagtta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actctgaggccccagctggctgatgagtgtaatcgagattgtaataaccttcctgagtta 380
Query: 181 tagcatgggtgtatcctactctcgacagacagcatgtgtgtgtgtgcatgtgtgtgcatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagcatgggtgtatcctactctcgacagacagcatgtgtgtgtgtgcatgtgtgtgcatg 440
Query: 241 catgtacatgtgtggatacccatcaatttgtgtgtggagctgtgtacagagctgctcctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 catgtacatgtgtggatacccatcaatttgtgtgtggagctgtgtacagagctgctcctg 500
Query: 301 caccagtgtacagggaccttggaggaactgggctggaatggacacatggccataggaagg 360
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caccagtgtacaggggccttggaggaactgggctggaatggacacatggccataggaagg 560
Query: 361 ggcaaggggtcctagtgctcaagccagaaatatagatacagctacgctgatgttccctga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggcaaggggtcctagtgctcaagccagaaatatagatacagctacgctgatgttccctga 620
Query: 421 catttgagtgaaaacggaagccagaggggatgtcctgtgaggaccctctgcctctatcca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 catttgagtgaaaacggaagccagaggggatgtcctgtgaggaccctctgcctctatcca 680
Query: 481 tcctaaagtggtacaggatggggtcacatggttttccaggaggaagaacaagaacagtga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tcctaaagtggtacaggatggggtcacatggttttccaggaggaagaacaagaacagtga 740
Query: 541 agtaaattgtgtgggaagctgttgtcacaaggttaggacatgtcagaaatcagatataac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agtaaattgtgtgggaagctgttgtcacaaggttaggacatgtcagaaatcagatataac 800
Query: 601 accccacatagaggatgggcaccccagagacagggagaccatagc 645
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 accccacatagaggatgggcaccccagagacagggagaccatagc 845
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1045
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1035
Effective search space: 657225
Effective search space used: 657225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
