Query= MSMg01no453_n15.b1 MSMg01no453_n15.b1 CHROMAT_FILE:
MSMg01no453_n15.b1 PHD_FILE: MSMg01no453_n15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:51 2005
(664 letters)
>mm_chr17_44752934_44753997
Length = 1064
Score = 1114 bits (576), Expect = 0.0
Identities = 628/660 (95%), Gaps = 26/660 (3%)
Strand = Plus / Plus
Query: 5 gaattcc-tatcttgctatactccatgttaattgctgccttattcactagaggagagacc 63
||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||| |
Sbjct: 227 gaattccatatcttgctatactccgtgttaattgttgccttattcactagaggagagagc 286
Query: 64 tggaatcaaccttagttgtccctccacaagtgactggataatgaaaatcggatatatatg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 tggaatcaaccttagttgtccctccacaagtgactggataatgaaaatcggatatatatg 346
Query: 124 aaatgtagatagatatagatatcacatttaatatatataggaatactacttaacatatat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 aaatgtagatagatatagatatcacatttaatatatataggaatactacttaacatatat 406
Query: 184 ggaattatatatatatatatacatacatatatatatatacatacacacacatttttatat 243
|||| | ||||||||||||||||||||||||||||||
Sbjct: 407 agaat-a-----------------------atatatatacatacacacacatttttatat 442
Query: 244 attacataatggaatactacttagctctaaaaagtgaaatttaaaatttgcaagaaaatg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 attacataatggaatactacttagctctaaaaagtgaaatttaaaatttgcaagaaaatg 502
Query: 304 gatgagatgcatattattaagtaagatcacatgatctcaaaaaagaaactgcattttcag 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gatgagatgcatattattaagtaagatcacatgatctcaaaaaagaaactgcattttcag 562
Query: 364 tctctcacaagtgggatgtggccaataatatatgtatatatggaaacaa-tgtgcacatg 422
||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 563 tctctcacaagtgggatatggccaataatatatgtatatatggaaacaaatgtgcacatg 622
Query: 423 gctacaggaaacatggagaaacaggacaaggtaaatatacaggggagcaggaagggcaga 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 gctacaggaaacatggagaaacaggacaaggtaaatatacaggggagcaggaagggcaga 682
Query: 483 tgcagataatgcacatgagttagaagagagaatacaaagctggttgtttttctaagtcga 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 tgcagataatgcacatgagttagaagagagaatacaaagctggttgtttttctaagtcga 742
Query: 543 actctatcctgggtgtttgtctgtctggttggttagtttggtatttttgatggtagataa 602
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 743 actctatcctgggtgtttgtctgtctggttggttggtttggtatttttgatggtagataa 802
Query: 603 gtgcataaaatagatccaataataaaagtgtaaaacctaattcacagcttccattctgaa 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 gtgcataaaatagatccaataataaaagtgtaaaacctaattcacagcttccattctgaa 862
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space: 689316
Effective search space used: 689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no453_n15.g1 MSMg01no453_n15.g1 CHROMAT_FILE:
MSMg01no453_n15.g1 PHD_FILE: MSMg01no453_n15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:51 2005
(683 letters)
>mm_chr17_44888621_44889703
Length = 1083
Score = 1031 bits (533), Expect = 0.0
Identities = 596/617 (96%)
Strand = Plus / Minus
Query: 67 ggtataggcatgtgagaaaagatgcccatggaggccagaggtgttggatccccttgaact 126
||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 1083 ggtataggcatgtgagagcaggtgcccatggaggccagaggtgttggatccccttgaact 1024
Query: 127 ggagttgaagctaattagaaggcatactgtgggttctgagagcaacacttgcgtcctcaa 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1023 ggagttgaagctaattagaaggcatactgtgggttctgagagcaacacttgcgtcctcaa 964
Query: 187 caagagcagcaagcgctcttaaccactgatacaatccttcccatcccaccatgttttcaa 246
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 963 caagagcagaaagcgctcttaaccactgatacaatccttcccatcccaccatgttttcaa 904
Query: 247 aattcaacggtgccacagtatttatcaatagttcatgcctttttatgctgttgaattaat 306
|| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 903 aactcaacagtgccacagtatttatcaatagttcatgcctttttatgctgttgaattaat 844
Query: 307 attctttggatgaatataacagttttaatttattctctcgttgagtgcttcccacatttt 366
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 843 attctttggatgaatataacagttttaatttattctctggttgagtgcttcccacatttt 784
Query: 367 gcttattatgagtatttacacacaaggtacaaggttttaaaaaatcttttgaaatctgac 426
|||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||| |
Sbjct: 783 gcttattatgagtatttacatacaaggtacaaggtttttaaaaatcttttgaagtctgtc 724
Query: 427 acacatatatatctacataatttgcaccctccctccctccctccttctaactcctctcat 486
|| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 723 acgcatatatatctacataatttgcaccctccctccctcccttcttctaactcctctcat 664
Query: 487 gcactcccaatttaattctttaattattattgcttcataaacgtgtgtgcatgtatacat 546
|||||||||||| |||||||||||||||||||||||||| | |||||||| | |||||||
Sbjct: 663 gcactcccaattcaattctttaattattattgcttcatatatgtgtgtgcgtatatacat 604
Query: 547 tatataacaggtgaatttgtatgtatattaatatatatttttatatatcacagcagttag 606
||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 603 tatataacatgtgaatttgtatgtatatgaatatatatttatatatatcacagcagttag 544
Query: 607 aaggacatggatatttattataaatggatacaaatgatgtagtcttttgtgtctggcttc 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 aaggacatggatatttattataaatggatacaaatgatgtagtcttttgtgtctggcttc 484
Query: 667 ttttattaatacaatgt 683
|||||||||||||||||
Sbjct: 483 ttttattaatacaatgt 467
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 683
Length of database: 1083
Length adjustment: 10
Effective length of query: 673
Effective length of database: 1073
Effective search space: 722129
Effective search space used: 722129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
