Query= MSMg01no454_i01.b1 MSMg01no454_i01.b1 CHROMAT_FILE:
MSMg01no454_i01.b1 PHD_FILE: MSMg01no454_i01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:25:43 2005
(557 letters)
>mm_chr17_32118266_32119222
Length = 957
Score = 992 bits (513), Expect = 0.0
Identities = 543/553 (98%)
Strand = Plus / Plus
Query: 5 gaattcattaaggtctccactgaagtaagaagttcttctgaaacttttttttctcaattg 64
||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcattaaggacttaactgaagtaagaagttcttctgaaacttttttttctcaattg 264
Query: 65 tactccagagaaaagcagccaagaagatgtgaggatggatgagtggctggattagcaaac 124
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttctccagagaaaagcagccaagaagatgtgaggatggatgagtggctggattagcaaac 324
Query: 125 gaacagcgaaagttagcaaaattaactctaaagaacggtagtgaagactgctcagcacca 184
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 325 gaacagcgaaagttagcaaaattaactctaaagaacggtaatgaagactgctcagcacca 384
Query: 185 aatcacagtcagcaaatggagacccaggagaaacaacacaccgctccgggtcagaagccg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aatcacagtcagcaaatggagacccaggagaaacaacacaccgctccgggtcagaagccg 444
Query: 245 ttagactcgcagcctagcacaagcatttctattgttgcaggaaagggccataatgcagcg 304
| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 445 tcagactcgcagcctagcacaagcatttctagtgaggcaggaaagggccataatgcagcg 504
Query: 305 caagcagccagcctttgtgacctgctcaggcctccatctgactgggcagagctcactgca 364
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 caagcagccagtctttgtgacctgctcaggcctccatctgactgggcagagctcactgca 564
Query: 365 ccagtccgtctactaaccgcaaagttaatgtcatctccaaacatcctcccaagtgtgtga 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ccagtccgtctactaaccgcaaagttaatgtcatctccaaacatcctcccaagtgtgtga 624
Query: 425 gaatgtctaacaactgtgtggacatagtggcacagtcaaggtgacatacagagtaacagc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gaatgtctaacaactgtgtggacatagtggcacagtcaaggtgacatacagagtaacagc 684
Query: 485 accgggctcagccagggagagtcagcttggctattcatttttcaaggagacttttcctca 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 accgggctcagccagggagagtcagcttggctattcatttttcaaggagacttttcctca 744
Query: 545 ttccactcacagg 557
|||||||||||||
Sbjct: 745 ttccactcacagg 757
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 557
Length of database: 957
Length adjustment: 10
Effective length of query: 547
Effective length of database: 947
Effective search space: 518009
Effective search space used: 518009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no454_i01.g1 MSMg01no454_i01.g1 CHROMAT_FILE:
MSMg01no454_i01.g1 PHD_FILE: MSMg01no454_i01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:25:43 2005
(372 letters)
>mm_chr17_32281226_32281998
Length = 773
Score = 690 bits (357), Expect = 0.0
Identities = 369/373 (98%), Gaps = 1/373 (0%)
Strand = Plus / Minus
Query: 1 ctttcttgcctc-atacagtgtccagctggctatgctggtgacagttgtgaggataatat 59
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 ctttcttgcctcaatacagtgtccagctggctatgctggtgacagttgtgaggataatat 514
Query: 60 agatgagtgtgcttcccagccctgccagaacggaggctcctgtatcgatcttgtggcccg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 agatgagtgtgcttcccagccctgccagaacggaggctcctgtatcgatcttgtggcccg 454
Query: 120 ctatctctgttcctgtccccctggcacactgggtatgttaaggccagggttgggggcagg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ctatctctgttcctgtccccctggcacactgggtatgttaaggccagggttgggggcagg 394
Query: 180 ataagaggatgagtttctagcctccactgaccatgctcctataccctaggagttctctgt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 ataagaggatgagtttctagcctccactgaccatgctcctataccctaggagttctctgt 334
Query: 240 gatatctatgaggacgactgtgacccaggcccatccttggactcaggcgttcagtgccta 299
|| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 333 gagatcaatgaggacgactgtgacctaggcccatccttggactcaggcgttcagtgccta 274
Query: 300 cacaatggcacctgtgtggacctggtgggtggcttccgctgtaactgtcccccaggatac 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 cacaatggcacctgtgtggacctggtgggtggcttccgctgtaactgtcccccaggatac 214
Query: 360 acaggtctgcact 372
|||||||||||||
Sbjct: 213 acaggtctgcact 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 773
Length adjustment: 9
Effective length of query: 363
Effective length of database: 764
Effective search space: 277332
Effective search space used: 277332
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
