Query= MSMg01no455_j02.b1 MSMg01no455_j02.b1 CHROMAT_FILE:
MSMg01no455_j02.b1 PHD_FILE: MSMg01no455_j02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:07 2005
(559 letters)
>mm_chr17_67752560_67753518
Length = 959
Score = 980 bits (507), Expect = 0.0
Identities = 543/555 (97%)
Strand = Plus / Minus
Query: 5 gaattcaagtatcccttaagcacacaggagatccaggcagctgcattacattctgaatcc 64
||||||||||| | |||||| |||| ||||||||| |||||||||||||||||||||||
Sbjct: 759 gaattcaagtagcaattaagcgcacatgagatccagacagctgcattacattctgaatcc 700
Query: 65 caggctgggctgacgaatctccctttaccttagtttgtcctattgcaagtgagaccactg 124
|||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 699 caggctgggctgacgaatctccctttaccttagtttatcctattgcaaatgagaccactg 640
Query: 125 atagcatctcactcactggcttgttagaggcttcaatacatgtgtaagatgtgtgggact 184
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 639 atagcatctcactcactggcttgttagaggcttcaatacatgtgtaagatgtctgggact 580
Query: 185 gttaaaaagctttaaagcaattacattgtacagaattacaaacaaatagctgacgtgcat 244
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 gttacaaagctttaaagcaattacattgtacagaattacaaacaaatagctgacgtgcat 520
Query: 245 tcaattctgcctatttaagatacccagattgtgaggttcaggtctaactcaggggtagag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 tcaattctgcctatttaagatacccagattgtgaggttcaggtctaactcaggggtagag 460
Query: 305 tgcaagcttaatcccaaagagctcttggttcaatctcaaatcgaaaagttatatgaaata 364
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 459 tgcaagcttaatcccaaagagctcttggttcaatctcaaatctaaaagttatatgaaata 400
Query: 365 cgctacaataggtaaggtttggcacacgcccacactgtaaaaccatcagcatagtcaaga 424
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 agctacaataggtaaggtttggcacacgcccacactgtaaaaccatcagcatagtcaaga 340
Query: 425 caatgaacacaaacatcaccccctggctcccccttccctttggtttcccagtgctgccat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 caatgaacacaaacatcaccccctggctcccccttccctttggtttcccagtgctgccat 280
Query: 485 ccctaggtgatctgataccccaaattaactatcattaagagtacttagagtcatagctca 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 ccctaggtgatctgataccccaaattaactatcattaagagtacttagagtcatagctca 220
Query: 545 aaaacggtaataaac 559
|||||||||||||||
Sbjct: 219 aaaacggtaataaac 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 559
Length of database: 959
Length adjustment: 10
Effective length of query: 549
Effective length of database: 949
Effective search space: 521001
Effective search space used: 521001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no455_j02.g1 MSMg01no455_j02.g1 CHROMAT_FILE:
MSMg01no455_j02.g1 PHD_FILE: MSMg01no455_j02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:07 2005
(587 letters)
>mm_chr17_67587960_67588946
Length = 987
Score = 1048 bits (542), Expect = 0.0
Identities = 569/578 (98%)
Strand = Plus / Plus
Query: 1 ccagaagcacttaaaactttaaggagtgactgacagtgtacctccacagaccaacacatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccagaagcacttaaaactttaaggagtgactgacagtgtacctccacagaccaacacatg 260
Query: 61 gcatcgaagccttaagtggtacactggcgggcataagggaaaatggcgaagttctcatga 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 gcatcgaagccttaagtggtacactggcgggcataagggaaaatggcaaagttctcatga 320
Query: 121 gagtgacagtccacgtctacagactaaaagaacaggcttcgcaggattctgggagagaga 180
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 321 gagtgacagtccacgtctacagactaaaagaagaggcttcgcaggattctgggagagaga 380
Query: 181 catacccagcaaccaaagaagccagactcctctcaaaatcagagggcttctgaagtggct 240
|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cataccgagcaaccaaaggagccagactcctctcaaaatcagagggcttctgaagtggct 440
Query: 241 cagctgggatgttcgtgctaccgagcaagatgcactgaattggattcctgatggcatgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagctgggatgttcgtgctaccgagcaagatgcactgaattggattcctgatggcatgtg 500
Query: 301 gaacaggagaaagatggctacttcaagttgtcctttgactccctcatgcataccttggca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaacaggagaaagatggctacttcaagttgtcctttgactccctcatgcataccttggca 560
Query: 361 tatgcccccacacatatatgtaaatatatatgtaaatatatgtacacatgcataaataca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tatgcccccacacatatatgtaaatatatatgtaaatatatgtacacatgcataaataca 620
Query: 421 taaatgtacacacatatacatatacataagcacacacacatatataatatatatgcatac 480
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 621 taaatgtacacacatatacatatacataagcacactcacatatataatatatatgcatac 680
Query: 481 acgcagaggataaatgttaagaacatcagtctgacacacacaccacatacacgaatatat 540
| |||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||
Sbjct: 681 atgcagaggataaatgttaaaaacatcagtctgacacacacaccacacacacaaatatat 740
Query: 541 atatatatatatatatatatatatatatatatatatat 578
||||||||||||||||||||||||||||||||||||||
Sbjct: 741 atatatatatatatatatatatatatatatatatatat 778
Score = 85.8 bits (44), Expect = 8e-21
Identities = 44/44 (100%)
Strand = Plus / Minus
Query: 537 atatatatatatatatatatatatatatatatatatatatatat 580
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 atatatatatatatatatatatatatatatatatatatatatat 735
Score = 85.8 bits (44), Expect = 8e-21
Identities = 44/44 (100%)
Strand = Plus / Minus
Query: 535 atatatatatatatatatatatatatatatatatatatatatat 578
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 atatatatatatatatatatatatatatatatatatatatatat 735
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 111
Number of extensions: 36
Number of successful extensions: 36
Number of sequences better than 10.0: 1
Number of HSP's gapped: 22
Number of HSP's successfully gapped: 7
Length of query: 587
Length of database: 987
Length adjustment: 10
Effective length of query: 577
Effective length of database: 977
Effective search space: 563729
Effective search space used: 563729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
