NNNNAATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTCAAGTGAATCCATCTGGTCCTGGGCTTTGCTTTGCTGG
GGAGTTTTTCCTTCTCTGCTGCTTATTAGCCTATTCAGCTTCTGTATTTG
TGCTCCATCCTAGGCAGGTGTTACATTTCTAGGAACGCATTCATGTCTCT
GAATTCTCTGATGTATCAGTGCATAGTCTTCTCCCTCATCCCTTTTCCTG
TGGAGCAGTGATGCTGCTTTCTAGTTCATCCACTCTGTGCACTTACCCCA
CCTAACCACTTGCCCATTGTATTGATCCAGGATTACAGATCTCATTTCCT
CATGGTTTTTGTTTTCCTATTGTTTTCTCATTCATTATTTCTATGAGCTC
TGCTGTAATTTTTTTTTCTTTTGTTAGAGTTTGAATGGTCTTGATCTCTG
TTCCTTGTTGTGTAGTTGGCTTGTCATTGTGGGAATCTTAAAAAAAAATA
AAGTTGATGCTTGTTTGTGCCATGTCTTTGCTTTCATTTGTCTTAAGGCA
TTTCCCAAATTCCCCTTATGATTTTTCTCTGATGCATCCAAGTTGACACC
CATATATTTGGGGATTCCTTCACTATTGATCTATAATCTCATCCCCTTAT
GACCAGGAAAGATACTTTGCATGACACAGCATCTGTGGATTTGTAAAGAC
TTGTCTTGAGGCCTGCTAATTGGTTGGGTTAAAAAAACTTCCGGACTGGC
TGGGTTCTTTGGGAAN

CAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXTTCAGAAATTCTCTCCAGCCAGAGCTATAATCATGGGGG
GTGGGGGCGGAGGGGTTCACAGAATGAAGCCTCTTGAACACACAAGAAAT
ACCCAAATGTCTGCAATAAACCATGTAGAAGGAAGTAAAATGTGGACGCA
CAAATACTCCTAGCCAACACATGTGGATTGTGTAAGAGCTGTGGCAGAAT
GTGTGCATAGTGAATGAGGCTGAAAAGCAGCAGATGCAGCCTCAAGGGCA
AGAAGAGATGAGCTGGCTGTTAATCTTTGACCTCCAGGAAGTGAGCCCTG
ATGAAGCTGCCTTAGTGTTTTCACTGCTGTGATAAGACACCATGGCCACC
TGAGGGGAGTCAGGGCAGGAACTCAAGGCAAGAAGTTGGAGGCAGGAGCT
GATGCAGAGGCCATGGAGGCATGCTGCTCTTTGGCTTGCTCCTCATACCT
TGCTCAGTCAGATTTCTTATGCAACCAGCCCAGGAGTGGCACCATGCATA
GAGAGCCATGTGCATCAGTCATTAATCAATACGTCCCATAGGTTTGCCCA
CAGTTCAATCTGGTGGGTGTGTTTTCCTCATCGGAGGTTGCCTCCTCCCA
AATGACTGATTCTTGTGTGAAGTTGACAACCAACAGGATACCTAGCCAAT
AGCAAGGACTTTTTAAGTCATTCCATTTTTTCAGCACCTCCCTACCCCAC
ATTTACCCCCCCATTTN

Query= MSMg01no458_m21.b1 MSMg01no458_m21.b1 CHROMAT_FILE:
MSMg01no458_m21.b1 PHD_FILE: MSMg01no458_m21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:30 2005
         (542 letters)



>mm_chr17_68529583_68530522
          Length = 940

 Score =  975 bits (504), Expect = 0.0
 Identities = 531/540 (98%), Gaps = 4/540 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattctcaagtgaatccatctggtcctgggctttgctttgctggggagtttttccttc 63
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 894 ggaattctcaagtgaagccatctggtcctgggctttgctttgctggggagtttttccttc 835

                                                                       
Query: 64  tctgctgcttattagcctattcagcttctgtatttgtgctccatcctaggcaggtgttac 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 834 tctgctgcttattagcctattcagcttctgtatttgtgctccatcctaggcaggtgttac 775

                                                                       
Query: 124 atttctaggaacgcattcatgtctctgaattctctgatgt-atcagtgcatagtcttctc 182
           |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 774 atttctaggaacgcattcatgtctctgaattctctgatgtga-cagtgcatagtcttctc 716

                                                                       
Query: 183 cctcatcccttttcctgtggagcagtgatgctgctttctagttcatccactctgtgcact 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 cctcatcccttttcctgtggagcagtgatgctgctttctagttcatccactctgtgcact 656

                                                                       
Query: 243 taccccacctaaccacttgcccattgtattgatccaggattacagatctcatttcctcat 302
           |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||
Sbjct: 655 taccccacctaaccacttgcccattgtattgatccaggaaaacagatctcatttcctcat 596

                                                                       
Query: 303 ggtttttgttttcctattgttttctcattcattatttctatgagctctgctgtaattttt 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 ggtttttgttttcctattgttttctcattcattatttctatgagctctgctgtaattttt 536

                                                                       
Query: 363 ttttcttttgttagagtttgaatggtcttgatctctgttccttgttgtgtagttggcttg 422
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 ttt-cttttgttagagtttgaatggtcttgatctctgttccttgttgtgtagttggcttg 477

                                                                       
Query: 423 tcattgtgggaatcttaaaaaaaaataaagttgatgcttgtttgtgccatgtctttgctt 482
           ||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||
Sbjct: 476 tcattgtgggaatcttaaaaagaa-taacgttgatgcttgtttgtgccatgtctttgctt 418

                                                                       
Query: 483 tcatttgtcttaaggcatttcccaaattccccttatgatttttctctgatgcatccaagt 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 tcatttgtcttaaggcatttcccaaattccccttatgatttttctctgatgcatccaagt 358


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 542
Length of database: 940
Length adjustment: 10
Effective length of query: 532
Effective length of database: 930
Effective search space:   494760
Effective search space used:   494760
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)