Query= MSMg01no459_b18.b1 MSMg01no459_b18.b1 CHROMAT_FILE:
MSMg01no459_b18.b1 PHD_FILE: MSMg01no459_b18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:54 2005
(465 letters)
>mm_chr17_45016855_45017719
Length = 865
Score = 862 bits (446), Expect = 0.0
Identities = 458/462 (99%)
Strand = Plus / Minus
Query: 4 ggaattctgggctattggaaggttttggcttgacagaggcatctaaagataacagtcagc 63
|||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 ggaattctgggcaattgtaaggttttggcttgacagaggcatctaaagataacagtcagc 606
Query: 64 taaaaggcaagagtctccattggcatactggttcttgcctctgaaatgtaggtggcgtgc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 605 taaaaggcaagagtctccattggcatactggttcttgcctctgaaatgtaggtggtgtgc 546
Query: 124 acacaaaagcagcaagccaccggaggactagaaagcatcagagggtaagacacttctctt 183
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 acacaacagcagcaagccaccggaggactagaaagcatcagagggtaagacacttctctt 486
Query: 184 gactactggcttaccaaagcagtcttaccatgataaagcaacagtggaaatgatgaggag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 gactactggcttaccaaagcagtcttaccatgataaagcaacagtggaaatgatgaggag 426
Query: 244 aaagactcaggcagtgacacaagggcagaagcaacacagcacatgaagggaggcaaacat 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 aaagactcaggcagtgacacaagggcagaagcaacacagcacatgaagggaggcaaacat 366
Query: 304 tcctgttcagtactggagaaagaggggaaggagactaaacggcaagcgcagcccacaggc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 tcctgttcagtactggagaaagaggggaaggagactaaacggcaagcgcagcccacaggc 306
Query: 364 cgggccagagagggtgcaaacagactgtgtagatgcttccccagtgaagggctgccaaga 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 cgggccagagagggtgcaaacagactgtgtagatgcttccccagtgaagggctgccaaga 246
Query: 424 attgtgcatgatgcccccacagcacagacaagacagcaggta 465
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 attgtgcatgatgcccccacagcacagacaagacagcaggta 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 865
Length adjustment: 10
Effective length of query: 455
Effective length of database: 855
Effective search space: 389025
Effective search space used: 389025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no459_b18.g1 MSMg01no459_b18.g1 CHROMAT_FILE:
MSMg01no459_b18.g1 PHD_FILE: MSMg01no459_b18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:54 2005
(375 letters)
>mm_chr17_44838351_44839126
Length = 776
Score = 615 bits (318), Expect = e-180
Identities = 357/376 (94%), Gaps = 13/376 (3%)
Strand = Plus / Plus
Query: 1 aaggaacccctgaagaa-taacatgcgggacctgtctcaattgtgcaccttagatccctt 59
||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaggaacccctgaagaattaacacgcgggacctgtctcaattgtgcaccttagatccctt 260
Query: 60 gagtctccagaccttcactgaaacctttgtccttctcagctgagatgtggacattctcac 119
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagtctccagaccttcactgaagcctttgtccttctcagctgagatgtggacattctcac 320
Query: 120 ggccacacagccaaccttctgcagggccctgacctggaaaactcttacccaggcttctgc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggccacacagccaaccttctgcagggccctgacctggaaaactcttacccaggcttctgc 380
Query: 180 cacagctccacttaaactaaaggagctagctcacagtctttctctggaaaagaatttctc 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 381 cacagctccacttaaactaaaggagctagctcacagtctttctctggaaaagaaattctc 440
Query: 240 agggaagaaaagaactgctaagggcaaaggggggggggtg------tcctaagggtgcaa 293
||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 441 agggaagaaaagaactgctaagggcaaagggggtggggtgggggggtcctaagggtgca- 499
Query: 294 gtgcagtatggactcttcctcagattaacccctacacagtcaactgcattgttgattcct 353
||| |||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 500 gtg-----tggactcttcctcagattaacccctacacagtcaactgcattattgattcct 554
Query: 354 cagaataaaaaaaaaa 369
||||| ||||||||||
Sbjct: 555 cagaagaaaaaaaaaa 570
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 375
Length of database: 776
Length adjustment: 9
Effective length of query: 366
Effective length of database: 767
Effective search space: 280722
Effective search space used: 280722
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
