Query= MSMg01no460_e17.b1 MSMg01no460_e17.b1 CHROMAT_FILE:
MSMg01no460_e17.b1 PHD_FILE: MSMg01no460_e17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:33:30 2005
(499 letters)
>mm_chr17_41072764_41073660
Length = 897
Score = 911 bits (471), Expect = 0.0
Identities = 492/500 (98%), Gaps = 4/500 (0%)
Strand = Plus / Plus
Query: 1 ttatgcggcttgtttggtgatccataataagtattcaatagtcatcaaggcttcactaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttatgcggcttgtttggtgatccataataagtattcaatagtcatcaaggcttcactaag 260
Query: 61 ttgataggtcagaaattatatgaaaaatagagttttaaactcccactgtccaatgttgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 261 ttgataggtcagaaattatatgaaaaatagagttttaaactcccactgtccaatgctgtg 320
Query: 121 taaagcacctggctaggcga-ctgtattaaagaaatctgtatctgattttctttttttct 179
|||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taaagcacctggctaggc-agctgtattaaagaaatctgtatctgattttctttttttct 379
Query: 180 tttttacaaaatcttaaggctctacatgttgaggttgtgtgatacttaagtatcaagtaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tttttacaaaatcttaaggctctacatgttgaggttgtgtgatacttaagtatcaagtaa 439
Query: 240 ttgaggcagtttgctgctttctgtgtgggtaaatggcaagtgcagcgaactatgattttc 299
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 440 ttgaggcagtttgctgctttctgtgtgggtaaatggcaagtgcagtgaactatgattttc 499
Query: 300 taggatttctagtacatgaaaatgtaaaattggccaagacagaaataagtttgacagcta 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 taggatttctagtacatgaaaatgtaaaattggccaagacagaaataagtttgacagcta 559
Query: 360 cacagagaccagatcatagatactttggttgcctgcttgtcttatactgtattttctcca 419
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ca--gagaccagatcatagatactttggttgcctgcttgtcttatactgtattttctcca 617
Query: 420 tacaccaatataaagtctactataagctagatagtctataaatgggttttgaatgcnaat 479
||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||
Sbjct: 618 tacaccaatataaagtctactataagctagataatctataaatgggttttgaatgcaaat 677
Query: 480 taattgaaatattaagttcc 499
||||||||||||||||||||
Sbjct: 678 taattgaaatattaagttcc 697
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 897
Length adjustment: 10
Effective length of query: 489
Effective length of database: 887
Effective search space: 433743
Effective search space used: 433743
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no460_e17.g1 MSMg01no460_e17.g1 CHROMAT_FILE:
MSMg01no460_e17.g1 PHD_FILE: MSMg01no460_e17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:33:30 2005
(489 letters)
>mm_chr17_41228844_41229732
Length = 889
Score = 487 bits (252), Expect = e-142
Identities = 294/308 (95%)
Strand = Plus / Minus
Query: 182 tggacagcctctttaatagatgatacttgaaaactagacacaggtagattattgaaatta 241
|||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 889 tggacaacctctttaatagatgatacttgaaaactagacacaggtagattatttaaatta 830
Query: 242 cattcttgtttcttactatataatattaacccaaaatttgataaagatatcaatgtaatc 301
||||||||||||||||||| ||||||| |||| |||||||||||| |||| |||||||||
Sbjct: 829 cattcttgtttcttactatgtaatattgaccccaaatttgataaatatattaatgtaatc 770
Query: 302 aatataatttaatgcaacattatctactaaaggaagtcttaatgaaaatgcttcaaaatg 361
||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 769 aatataacttaatgcaacattatctactaaaggaagtcttaatgaaaatatttcaaaatg 710
Query: 362 tttgtataggcagcaattttcaaactatgaaattgtacatagctgagataataatcagta 421
||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 709 tttgtataggcagcaattttcaaactatgaaattgtacatagcagagaaaataatcagta 650
Query: 422 cagggcagagataatatataaagttagaaaatgtatattatccactgggggaaaacattt 481
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 cagggcaaaaataatatataaagttagaaaatgtatattatccactgggggaaaacattt 590
Query: 482 aaactaga 489
||||||||
Sbjct: 589 aaactaga 582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 489
Length of database: 889
Length adjustment: 10
Effective length of query: 479
Effective length of database: 879
Effective search space: 421041
Effective search space used: 421041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
