ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTGAAATTGGCCAATTGGCCTTCTTAAAAGACACATGGTGTGGTAAATG
TCCCTCCACAGGCTCAAGGTTGACTGCTTGGTTCCTAGTTATTGCCATTA
CTGGAGGATGTGGAACTTTCATGAAAGTGATGAGGGAAGGTGCTCACAGG
TTACATCTAGCTCTGATTCTGGTCTTTGTTTCTCTATGGCTGGATCTGTC
CAGATATGAAAACATTCTGCTATGTAGTCCTGCTGGACTACAGCTGAACT
ACATAGAGTCCTATGAACTCTAGAGAAAAATCCTCTGAGCCAGGGAGCAG
GTTCCTCTGTCAGATGATGAAAAAAGTGGGTGATACAACACACACACATA
TACACACACAAACGAACATGCACACATATGCACACATATGCACACACATG
CACACACATGCACACACATGCACTGTGGGCGAAATACTTTGAGAGAAGTA
TTGTACTTCTCTGATGCATCTGAGAAATACTGTATTTCAGCGGTTAACAT
CCGTGTTCCTGTGAGGATCAAAGGATGAAATAATACCTTTCTTTTTTTTT
CTGGAGATTTTTCTTTATTTTAATTTTCTAAGGTTATTCTCTTTTTCCTG
GTCCCCCCTCCCTGGAAAGGCTCTATTCCTATTTAAATCCCCCCTTGTTT
TCAATAATGGAGTGTTCTCTTACCCTTCCCTCTCTCCCCCC

AATACACCGNNAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXAGTTGGCAACAAGAGGCCAGATTCGAGC
TCAGTAGAGACTCCATTATGGAAAAGCATGGNGGAATAGTTATACCATGT
TAGGNAAGATTATGAGTTGGNATGNTACTGGTTTCATATGGAGATTAACC
ATANCGTGAAANNNAATGCCTGTTGACAATGGNTGGATATGGNATGTCTC
TGTCTCGTTTGTGTTTTTTTTTTTTTTGTTATGTTTTATGTTTTTGTATT
TGTTTGGGGCTGTGNNCAAACCCCCTNAAACCCGAAAATTAANCTTTAAG
TTTGTGCTGGGGGGTGGGCTAAAAACCCCAAAANCCTCCNNCCCCACCNN
NNCCCCCCCCCCAAAAANNCCCCNAAAANNCCCCCCCNNNTCCCCCCCAA
ACCCCCCCAACCCCCAATAANAAAAACCCCCCTTAACCCCAAAAAAAAAN
ACNCCNNTTCCTCCCCACACCCCCCCCNNNNNCACCNNNNNACAAAAACC
CCCCNNCCCCCCCCCCCCCCCCCCCCCCCAAAAAAATCCTCNCCCAAACA
AAACCCCACCCCCCCCCACACACCAAACCCCCCCCCNCCCCCCNNCAAAA
CCACNACCACCCCCCCNNCCCCCCCCCCACAACCCAATCCCCCNCNCCAC
CCCCCCCCACCNCCNCCCCCCCCCCCACCNNCAAACCNCANNAAACCCCC
CACCCCCCCCCCCCCCACCCCTCCCCCCCCCCCCCCCNCACCCAAAAACC
ACCCATTTCTCCCCCATTTCTCTATTTTTTTTTTTTTTTT

Query= MSMg01no460_j22.b1 MSMg01no460_j22.b1 CHROMAT_FILE:
MSMg01no460_j22.b1 PHD_FILE: MSMg01no460_j22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:33:55 2005
         (456 letters)



>mm_chr17_69008094_69008949
          Length = 856

 Score =  803 bits (415), Expect = 0.0
 Identities = 424/427 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctgaaattggccaattggccttcttaaaagacacatggtgtggtaaatgtccctc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 678 gaattctgaaattggccaattggccttcttaaaagacacatggtgtggttaatgtccctc 619

                                                                       
Query: 65  cacaggctcaaggttgactgcttggttcctagttattgccattactggaggatgtggaac 124
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 tacaggctcaaggttgactgcttggttcctagttattgccattactggaggatgtggaac 559

                                                                       
Query: 125 tttcatgaaagtgatgagggaaggtgctcacaggttacatctagctctgattctggtctt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 tttcatgaaagtgatgagggaaggtgctcacaggttacatctagctctgattctggtctt 499

                                                                       
Query: 185 tgtttctctatggctggatctgtccagatatgaaaacattctgctatgtagtcctgctgg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 tgtttctctatggctggatctgtccagatatgaaaacattctgctatgtagtcctgctgg 439

                                                                       
Query: 245 actacagctgaactacatagagtcctatgaactctagagaaaaatcctctgagccaggga 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 actacagctgaactacatagagtcctatgaactctagagaaaaatcctctgagccaggga 379

                                                                       
Query: 305 gcaggttcctctgtcagatgatgaaaaaagtgggtgatacaacacacacacatatacaca 364
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 378 gcaggttcctctgtcagatgatgaaaaaagtgggtgatacaacacacacacacatacaca 319

                                                                       
Query: 365 cacaaacgaacatgcacacatatgcacacatatgcacacacatgcacacacatgcacaca 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 cacaaacgaacatgcacacatatgcacacatatgcacacacatgcacacacatgcacaca 259

                  
Query: 425 catgcac 431
           |||||||
Sbjct: 258 catgcac 252


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 856
Length adjustment: 10
Effective length of query: 446
Effective length of database: 846
Effective search space:   377316
Effective search space used:   377316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)