Query= MSMg01no461_l24.b1 MSMg01no461_l24.b1 CHROMAT_FILE:
MSMg01no461_l24.b1 PHD_FILE: MSMg01no461_l24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:28 2005
(505 letters)
>mm_chr17_54413476_54414379
Length = 904
Score = 938 bits (485), Expect = 0.0
Identities = 500/505 (99%), Gaps = 1/505 (0%)
Strand = Plus / Minus
Query: 1 tattatctctcaaagcatcaaaaggtggaagtcctttgcttaaaaatgtgacttaaaaat 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 tattatctctcaaagtatcaaaaggtggaagtcctttgcttaaaaatgtgacttaaaaat 745
Query: 61 tcctagtatgacttttaaaatttaaagttaaataattttacatattgtaatatcctactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tcctagtatgacttttaaaatttaaagttaaataattttacatattgtaatatcctactt 685
Query: 121 ttcagtggtgtctcaattcgtaggcctctttactgtatgtatattacataagaaagataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ttcagtggtgtctcaattcgtaggcctctttactgtatgtatattacataagaaagataa 625
Query: 181 ttcatttaccctccagtctatctcagaatcaactcactaactatggactatttgaaagta 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ttaatttaccctccagtctatctcagaatcaactcactaactatggactatttgaaagta 565
Query: 241 tggagtctgatatgctcaaatgtggggtgagaaaagaatcaaagaaaaaagaaaacacag 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tggagtctgagatgctcaaatgtggggtgagaaaagaatcaaagaaaaaagaaaacacag 505
Query: 301 attaaaaaatagaaaactttgggcatgaaaaactactagtgacaaggatgaaatttctgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 attaaaaaatagaaaactttgggcatgaaaaactactagtgacaaggatgaaatttctgg 445
Query: 361 taaacatggtatttcagacccacaaggtctttcaacaaagacaaaagagtgaattttgcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 taaacatggtatttcagacccacaaggtctttcaacaaagacaaaagagtgaattttgcc 385
Query: 421 caactcatcatctcgtgcccttccatcggattgttaatgtgcgttcttgaattatgaacg 480
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 caactcatcatct-gtgcccttccatcggattgttaatgtgcgttcttgaattatgaaca 326
Query: 481 tcatggagtctcattcatactgtag 505
|||||||||||||||||||||||||
Sbjct: 325 tcatggagtctcattcatactgtag 301
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 904
Length adjustment: 10
Effective length of query: 495
Effective length of database: 894
Effective search space: 442530
Effective search space used: 442530
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no461_l24.g1 MSMg01no461_l24.g1 CHROMAT_FILE:
MSMg01no461_l24.g1 PHD_FILE: MSMg01no461_l24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:28 2005
(240 letters)
>mm_chr17_54328861_54329500
Length = 640
Score = 433 bits (224), Expect = e-126
Identities = 236/240 (98%), Gaps = 1/240 (0%)
Strand = Plus / Plus
Query: 1 ctttgtttttccccaagcaattcattggcacccactccacactataactcctattaaagt 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 ctttgtttttccccaagcaattcattggcacccactccacactgtaactcctattaaagt 260
Query: 61 cattccctgtgctgagaactcacatactgtctgctctgggtttgaaaggctggggtgaca 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 261 cattccctgtgctgagaactcacatactgtctgctctgggtttgaaagcctggggtgaca 320
Query: 121 tactggtgttgccatttactagcttattaacactgagctggctatgaattgtcctaggtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tactggtgttgccatttactagcttattaacactgagctggctatgaattgtcctaggtc 380
Query: 181 attagttcatcatctgtgaagtgggcataatgattctgctttctttgtcgttttgttgta 240
|||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||
Sbjct: 381 attagttcatcatctgtgaaatgggcataatgat-ctgctttctttgtcgttttgttgta 439
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
