NNNNAAATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAAT
CCGCGGAATTCAAAGTGTTTTCCTTCAGAAACCCAAATAACCCTATTTTA
AAAATGGGATAGAGAGCTAAACAAAGAGTTCTCAACTGAGGAATCTCAAA
TGGCTGAGAAGCACCTAATGCAATGCTCAACATCCTTAGTCATCAGGGAA
ATGCAGCTCGAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATTGG
CTAAAATAAAAAACTCAGGTGATAGCCCATGTTGCTGAGAATGCAGAGAA
AGAGGACACAGCCCCATTCCTGGTGGGACTGCAAGCTGGTACAACCACTT
TGGAAATCAATCTGTCAGTTCCTCAGAAAATTGGAAATAGTTCTATCTGA
AGATCCAGCTATAGCACTAGCCCCAAATAGAGGGATTGGGTGACCTACGT
ATCTTAGAATATTAACCCCAAATCGTCCCTGTCTAAAGGAAATGTAGGGA
CAAAAATGGGGCATAGGATGAAGGAAAGGCCATCCAGAAATTGCCCCACC
ATACAATCCATTCTATGCACAGACACCAAACCCAGACACTCTTGCTGATG
TCAAGATGTGCTTGCAGACAAAAGCCTGGTATGACTGTCCCCTGACTGAG
TGGCTCTGTCAGCTCCTGACTAAGACAGATGCAGACACACACAGCTAGCC
ATTGGACTGAACCTGGGGACCCCATTGGAAGAATTAGGGAAAAGGCTGAA
GGAG

NNNNCCGATGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXCCACATATAAAAAATATCTTAAT
CATTTTATCCTTCCCTCCTATCAATACCCTCCTAGACCCTCTTCCTACTT
AATGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCA
GCTAAATAGTGCTGCCAGTATTTGAACCAGTTGGGGGCTATCTGCTGGAG
CTTGGGTAACATTTTAGGAAGTCATCCCCTTGATAGGATTTTTTGATCTT
AATATCTCACTGACTGAGGTATATAGTCAGGTTTGGAAACCCTTTCCTGA
GCTATAATAGGCAAACAGATGTAAAATCAGTAGAAGAGACTAAAGAGAAG
AGGATGGGGAAGTGAAGAAAGAGAGAAGATGCAGAAAGAAAGGGGGAAGC
ATGGCAGAAAGTAACCTGCAAAAGGACAGAATAAACTTTCGATGGAAATC
CAGAGAGTGTCAGTGAGCAGCTGCCACTGTGATTTGTACCAGTGTAGAAG
AAAAGAGGCAGGAGAACAATGACTCCTAATCCACAGGGACCCTAATTACC
CCCGCATTCATCGTTTGTATACTAAAAGTAAATTAATTGCAATAAGGCAT
TGTTGGTGAGTGGAATCCGCCTGCTTCCATGTTTGCCTCTTTGTGGTCCC
TGGAATGCTGAAAGTTACTGGGGAAAAAAGGTCCCTTCCTATGACACCCC
TAATTAAAN

Query= MSMg01no463_n17.g1 MSMg01no463_n17.g1 CHROMAT_FILE:
MSMg01no463_n17.g1 PHD_FILE: MSMg01no463_n17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:26 2005
         (561 letters)



>mm_chr17_82248056_82249017
          Length = 962

 Score = 1052 bits (544), Expect = 0.0
 Identities = 561/572 (98%), Gaps = 11/572 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   cacatataaaaaatatcttaatcattttatccttccctcctatcaataccctcctagacc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 cacatataaaaaatatcttaatcattttatccttccctcctatcaataccctcctagacc 250

                                                                       
Query: 61  ctcttcctacttaatgctctctctctctctctctctctctctctctctctct-t------ 113
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |      
Sbjct: 251 ctcttcctacttaatgctctctctctctctctctctctctctctctctctctctctctct 310

                                                                       
Query: 114 ---tctctctcagctaaatagtgctgccagtatttgaaccagttgggggctatctgctgg 170
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ctctctctctcagctaaatagtgctgccagtatttgaaccagttgggggctatctgctgg 370

                                                                       
Query: 171 agcttgggtaacattttaggaagtcatccccttgataggattttttgatcttaatatctc 230
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 agcttgggtaacattttaggaagtcatccccttgataggattttttgatcttaatatctc 430

                                                                       
Query: 231 actgactgaggtatatagtcaggtttggaaaccctttcctgagctataataggcaaacag 290
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 actgactgaggtatatagtcaggtttggaaaccctttcctgagctataataggcaaacag 490

                                                                       
Query: 291 atgtaaaatcagtagaagagactaaagagaagaggatggggaagtgaagaaagagagaag 350
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 atgtaaaatcagtagaagagactaaagagaagaggatggggaagtgaagaaagagagaag 550

                                                                       
Query: 351 atgcagaaagaaagggggaagcatggcagaaagtaacctgcaaaaggacagaataaactt 410
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 atgcagaaagaaagggggaagcatggcagaaagtaacctgcaaaaggacagaataaactt 610

                                                                       
Query: 411 tcgatggaaatccagagagtgtcagtgagcagctgcc-actgtgatttgtaccagtgtag 469
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 611 tcgatggaaatccagagagtgtcagtgagcagctgccgactgtgatttgtaccagtgtag 670

                                                                       
Query: 470 aagaaaagaggcaggagaacaatgactcctaatccacagggaccctaattacccccgcat 529
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 aagaaaagaggcaggagaacaatgactcctaatccacagggaccctaattacccccgcat 730

                                           
Query: 530 tcatcgtttgtatactaaaagtaaattaattg 561
           ||||||||||||||||||||||||||||||||
Sbjct: 731 tcatcgtttgtatactaaaagtaaattaattg 762


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 55
Number of extensions: 19
Number of successful extensions: 19
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 1
Length of query: 561
Length of database: 962
Length adjustment: 10
Effective length of query: 551
Effective length of database: 952
Effective search space:   524552
Effective search space used:   524552
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)