Query= MSMg01no463_o01.b1 MSMg01no463_o01.b1 CHROMAT_FILE:
MSMg01no463_o01.b1 PHD_FILE: MSMg01no463_o01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:27 2005
(424 letters)
>mm_chr17_85222794_85223616
Length = 823
Score = 750 bits (388), Expect = 0.0
Identities = 415/424 (97%), Gaps = 1/424 (0%)
Strand = Plus / Plus
Query: 1 atggagaaatttccttctttggaaattcaacccaaagactattgatgtagcttccattgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 201 atggagaaatttccttctttggaaattcaacccaaagactattgatgtagcttccatcgc 260
Query: 61 ttactgaccccattgggtaccaagggaaaggatttggttttccatgggctcagcaaactc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttactgaccccattgggtaccaagggaaaggatttggttttccatgggctcagcaaactc 320
Query: 121 ttattgaacaagcaagctagacactggccctcacccacagtcccaaaaagaagcgctact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttattgaacaagcaagctagacactggccctcacccacagtcccaaaaagaagcgctact 380
Query: 181 caaagagaactgtaataagggctcagaccaagaaagggttaaaggtcatttcccagagga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caaagagaactgtaataagggctcagaccaagaaagggttaaaggtcatttcccagagga 440
Query: 241 catttgttttttattaaaatctgaggatgagtaggagtgacttggcaaggaaatgggaaa 300
|||||||| | | ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 catttgttgtgaactaagatctgaggatgagtaggagtgacttggcaaggaaatgggaaa 500
Query: 301 gaacaacccagccccgagagtccctgaagctgagagcatgtgcatggtgtgccaagatca 360
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaacaacccagccctga-agtccctgaagctgagagcatgtgcatggtgtgccaagatca 559
Query: 361 tgcatagcccagagcagaggcttttaaacacagccctgctttctttactaaaatctttaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 560 tgcatagcccagagcagaggcttttaaacacagccctgctttctttactaaaatcattaa 619
Query: 421 aaaa 424
||||
Sbjct: 620 aaaa 623
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 823
Length adjustment: 9
Effective length of query: 415
Effective length of database: 814
Effective search space: 337810
Effective search space used: 337810
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no463_o01.g1 MSMg01no463_o01.g1 CHROMAT_FILE:
MSMg01no463_o01.g1 PHD_FILE: MSMg01no463_o01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:27 2005
(485 letters)
>mm_chr17_85406088_85406972
Length = 885
Score = 884 bits (457), Expect = 0.0
Identities = 478/485 (98%)
Strand = Plus / Minus
Query: 1 agcaggatgtaattcttttaaggcttgcccatcaaagttacattcagaaataattgagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 agcaggatgtaattcttttaaggcttgcccatcaaagttacattcagaaataattgagaa 496
Query: 61 aacaggagtatgttcatggctatcaattcagtcagtgactacgttctgaaggctatttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 aacaggagtatgttcatggctatcaattcagtcagtgactacgttctgaaggctatttct 436
Query: 121 gacagtggaggccccatgtggcatctataacagaactgtcatcagatacagcaaaattta 180
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gacagtgtaggccccatgtggcatctataacagaactgtcatcagatacagcaaaattta 376
Query: 181 agctgtcagcatcctttacatatttgtttgaggtttctctgagtttctcatatctgtatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 agctgtcagcatcctttacatatttgtttgaggtttctctgagtttctcatatctgtatt 316
Query: 241 tttacattatggctcacagttttggatataaatcttgaatactatgaggtaagtacaagc 300
||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 315 tttacattaaggctcacagttttggatataaatcttgagtactatgaggtaagtacaagc 256
Query: 301 aacaaaagattcagactgcagaggaagggtacattgtttttaaaacagtgctgcaccggg 360
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 gacaaatgattcagactgcagaggaagggtacattgtttttaaaacagtgctgcaccggg 196
Query: 361 cgtggtggcgcacgcctttaatcccagcactcgggaggcagaggcaggtggatttctgag 420
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 195 cgtggtggcgcacgcctttaatcccagcactcgggaggcagaggcaggcgggtttctgag 136
Query: 421 ttcgaggccagcctggtctacaaagtgagttccaggacagccatgctacacagagaaacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 ttcgaggccagcctggtctacaaagtgagttccaggacagccatgctacacagagaaacc 76
Query: 481 ctgtc 485
|||||
Sbjct: 75 ctgtc 71
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 485
Length of database: 885
Length adjustment: 10
Effective length of query: 475
Effective length of database: 875
Effective search space: 415625
Effective search space used: 415625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
