MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-466E01
Chromosome	17 (Build37)
Map Location	81,120,548 - 81,120,768
singlet/doublet	singlet
Overlap gene	Map4k3
Upstream gene	EG668821, Arl6ip2, LOC625074, Hnrpll, Gpx4-ps, Galm, Sfrs7, 4930560E09Rik, Gemin6, Dhx57, Morn2, Sos1, Cdkl4, F420015M19Rik
Downstream gene	LOC100043697, C230072F16Rik, LOC675572, EG668830, Tmem178, Thumpd2, LOC100043700, LOC100043704, Slc8a1
Link	Open Mouse BAC browser

Click to get alignment info.

name	EG668821 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668821 MGI:3644108
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Arl6ip2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56298 MGI:1929492
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC625074 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:625074
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 389 ESTs, 5 Proteins pseudo : _no_value

name	Hnrpll (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72692 MGI:1919942
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpx4-ps (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110531 MGI:1890509
definition	note : glutathione peroxidase 4, pseudogene pseudo : _no_value

name	Galm (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319625 MGI:2442420
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sfrs7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:225027 MGI:1926232
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930560E09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67737 MGI:1914987
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 3 ESTs, 8 Proteins

name	Gemin6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67242 MGI:1914492
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dhx57 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:106794 MGI:2147067
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Morn2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:378462 MGI:2674071
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sos1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20662 MGI:98354
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cdkl4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381113 MGI:3587025
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	F420015M19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:619329 MGI:3588283
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 1 Protein

name	Map4k3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:225028 MGI:2154405
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043697 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043697
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	C230072F16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320784 MGI:2444727
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	LOC675572 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:675572
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	EG668830 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668830 MGI:3643270
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 288 ESTs, 2 Proteins

name	Tmem178 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68027 MGI:1915277
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Thumpd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72167 MGI:1919417
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 47 ESTs, 3 Proteins

name	LOC100043700 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043700
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC100043704 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043704
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	Slc8a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20541 MGI:107956
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG668821 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94402172 GeneID:668821 MGI:3644108
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG668821 transcript_id : XM_001003779.1

name	Arl6ip2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119372303 GeneID:56298 MGI:1929492
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ADP-ribosylation factor-like 6 interacting protein 2 transcript_id : NM_178050.3

name	Arl6ip2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119372299 GeneID:56298 MGI:1929492
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ADP-ribosylation factor-like 6 interacting protein 2 transcript_id : NM_019717.2

name	Hnrpll (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110347534 GeneID:72692 MGI:1919942
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heterogeneous nuclear ribonucleoprotein L-like transcript_id : NM_144802.3

name	Galm (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142387049 GeneID:319625 MGI:2442420
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : galactose mutarotase transcript_id : NM_176963.3

name	Sfrs7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22122584 GeneID:225027 MGI:1926232
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : splicing factor, arginine/serine-rich 7 transcript_id : NM_146083.1

name	4930560E09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94402174 GeneID:67737 MGI:1914987
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 3 ESTs, 8 Proteins product : RIKEN cDNA 4930560E09 gene transcript_id : XM_283466.6

name	Gemin6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802223 GeneID:67242 MGI:1914492
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gem (nuclear organelle) associated protein 6 transcript_id : NM_026053.2

name	Dhx57 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:39573733 GeneID:106794 MGI:2147067
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 transcript_id : NM_198942.1

name	Morn2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34850747 GeneID:378462 MGI:2674071
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MORN repeat containing 2 transcript_id : NM_194269.1

name	Sos1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117414169 GeneID:20662 MGI:98354
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Son of sevenless homolog 1 (Drosophila) transcript_id : NM_009231.2

name	Cdkl4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142343651 GeneID:381113 MGI:3587025
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cyclin-dependent kinase-like 4 transcript_id : NM_001033443.2

name	F420015M19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94402179 GeneID:619329 MGI:3588283
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 1 Protein product : RIKEN cDNA F420015M19 gene transcript_id : XM_001003844.1

name	Map4k3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486874 GeneID:225028 MGI:2154405
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitogen-activated protein kinase kinase kinase kinase 3 transcript_id : NM_001081357.1

name	LOC100043697 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268819 GeneID:100043697
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : hypothetical protein LOC100043697 transcript_id : XM_001480757.1

name	C230072F16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94402181 GeneID:320784 MGI:2444727
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : RIKEN cDNA C230072F16 gene transcript_id : XM_001003864.1

name	LOC675572 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268922 GeneID:675572
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical LOC675572 transcript_id : XM_001481199.1

name	EG668830 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94402183 GeneID:668830 MGI:3643270
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 288 ESTs, 2 Proteins product : predicted gene, EG668830 transcript_id : XM_001003873.1

name	Tmem178 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124517675 GeneID:68027 MGI:1915277
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 178 transcript_id : NM_026516.2

name	Thumpd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268821 GeneID:72167 MGI:1919417
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 47 ESTs, 3 Proteins product : THUMP domain containing 2, transcript variant 3 transcript_id : XM_898870.3

name	LOC100043704 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268823 GeneID:100043704
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : similar to Ubtf protein transcript_id : XM_001480762.1

name	Slc8a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119120889 GeneID:20541 MGI:107956
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 8 (sodium/calcium exchanger), member 1 transcript_id : NM_011406.2

name	EG668821 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94402173 GeneID:668821 MGI:3644108
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001003779.1

name	Arl6ip2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119372300 GeneID:56298 MGI:1929492
definition	GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006955 - immune response [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; ARL-6 interacting protein-2; ADP-ribosylation-like factor 6 interacting protein 2 product : ADP-ribosylation factor-like 6 interacting protein 2 isoform 1 protein_id : NP_062691.3

name	Arl6ip2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119372304 GeneID:56298 MGI:1929492
definition	GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006955 - immune response [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; ARL-6 interacting protein-2; ADP-ribosylation-like factor 6 interacting protein 2 product : ADP-ribosylation factor-like 6 interacting protein 2 isoform 2 protein_id : NP_835151.2

name	Hnrpll (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110347535 GeneID:72692 MGI:1919942
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO:0019028 - viral capsid [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0006397 - mRNA processing [Evidence IEA] codon_start : 1 product : heterogeneous nuclear ribonucleoprotein L-like protein_id : NP_659051.3

name	Galm (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28892785 CCDS:CCDS28987.1 GeneID:319625 MGI:2442420
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0004034 - aldose 1-epimerase activity [Evidence IEA] [Evidence ISS]; GO:0016853 - isomerase activity [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence ISS] GO_process : GO:0005975 - carbohydrate metabolism [Evidence IEA] [Evidence ISS]; GO:0006012 - galactose metabolism [Evidence IEA] codon_start : 1 product : aldose 1-epimerase protein_id : NP_795937.1

name	Sfrs7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122585 CCDS:CCDS28988.1 GeneID:225027 MGI:1926232
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003723 - RNA binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006397 - mRNA processing [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA] codon_start : 1 note : splicing factor, arginine/serine-rich 7 (35kD) product : splicing factor, arginine/serine-rich 7 protein_id : NP_666195.1

name	4930560E09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51770412 GeneID:67737 MGI:1914987
definition	codon_start : 1 product : hypothetical protein LOC67737 protein_id : XP_283466.3

name	Gemin6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313050 CCDS:CCDS28989.1 GeneID:67242 MGI:1914492
definition	GO_component : GO:0016604 - nuclear body [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA]; GO:0005681 - spliceosome complex [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006397 - mRNA processing [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA]; GO:0000245 - spliceosome assembly [Evidence IEA] codon_start : 1 product : gem (nuclear organelle) associated protein 6 protein_id : NP_080329.1

name	Dhx57 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:39573734 CCDS:CCDS28990.1 GeneID:106794 MGI:2147067
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0008026 - ATP-dependent helicase activity [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation product : DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 homolog protein_id : NP_945180.1

name	Morn2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34850748 GeneID:378462 MGI:2674071
definition	codon_start : 1 product : protein containing single MORN motif in testis protein_id : NP_919245.1

name	Sos1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117414170 GeneID:20662 MGI:98354
definition	GO_component : GO:0005694 - chromosome [Evidence IEA]; GO:0005622 - intracellular [Evidence IEA]; GO:0000786 - nucleosome [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0005088 - Ras guanyl-nucleotide exchange factor activity [Evidence IMP]; GO:0005089 - Rho guanyl-nucleotide exchange factor activity [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0035023 - regulation of Rho protein signal transduction [Evidence IEA]; GO:0051056 - regulation of small GTPase mediated signal transduction [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IMP] codon_start : 1 note : guanine nucleotide releasing factor; son-of-sevenless 1; ras guanine exchange factor product : son of sevenless 1 protein_id : NP_033257.2

name	Cdkl4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84370314 CCDS:CCDS28992.1 GeneID:381113 MGI:3587025
definition	GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : cyclin-dependent kinase-like 4 protein_id : NP_001028615.1

name	F420015M19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94402180 GeneID:619329 MGI:3588283
definition	codon_start : 1 product : similar to putative retrovirus-related gag protein protein_id : XP_001003844.1

name	Map4k3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486875 GeneID:225028 MGI:2154405
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA] [Evidence ISS]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence ISS] [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0005083 - small GTPase regulator activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence ISS] [Evidence IEA]; GO:0007243 - protein kinase cascade [Evidence ISS]; GO:0006950 - response to stress [Evidence ISS] codon_start : 1 note : germinal center kinase-like kinase-like product : mitogen-activated protein kinase kinase kinase kinase 3 protein_id : NP_001074826.1

name	LOC100043697 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268820 GeneID:100043697
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480807.1

name	C230072F16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94402182 GeneID:320784 MGI:2444727
definition	codon_start : 1 product : hypothetical protein LOC320784 protein_id : XP_001003864.1

name	LOC675572 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268923 GeneID:675572
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481249.1

name	EG668830 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94402184 GeneID:668830 MGI:3643270
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001003873.1

name	Tmem178 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124517676 GeneID:68027 MGI:1915277
definition	codon_start : 1 product : hypothetical protein LOC68027 protein_id : NP_080792.2

name	Thumpd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268822 GeneID:72167 MGI:1919417
definition	codon_start : 1 product : THUMP domain containing 2 isoform 3 protein_id : XP_903963.2

name	LOC100043704 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268824 GeneID:100043704
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480812.1

name	Slc8a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119120890 GeneID:20541 MGI:107956
definition	GO_component : GO:0016021 - integral to membrane [Evidence TAS]; GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA]; GO:0042383 - sarcolemma [Evidence IDA] GO_function : GO:0015297 - antiporter activity [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005432 - calcium:sodium antiporter activity [Evidence IDA]; GO:0005516 - calmodulin binding [Evidence IEA]; GO:0005386 - carrier activity [Evidence IEA]; GO:0031072 - heat shock protein binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0031402 - sodium ion binding [Evidence IEA] GO_process : GO:0006816 - calcium ion transport [Evidence IMP] [Evidence IDA]; GO:0002026 - cardiac inotropy [Evidence IMP]; GO:0007154 - cell communication [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IDA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : sodium/calcium exchanger; Na/Ca exchanger product : solute carrier family 8 (sodium/calcium exchanger), member 1 protein_id : NP_035536.2

name	LOC100043700 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043700
definition	number : 1 pseudo : _no_value

name	LOC625074 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268921 GeneID:625074
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 389 ESTs, 5 Proteins product : similar to eukaryotic translation initiation factor 3, subunit 3 gamma, 40kDa pseudo : _no_value transcript_id : XR_035043.1

clone name	MSMg01-476H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-208C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387L11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-161P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-215N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-216I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-210M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-087J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-102J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-306P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-278H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-172K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094A22
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-466E01.T7 (MSMg01no466_e01.b1)	MSMg01-466E01.TJ (MSMg01no466_e01.g1)
ACC	AG550242	AG550243
length	781	830
length of high quality (start - end)	---	231 (81 - 311)
definition	CHROMAT_FILE: MSMg01no466_e01.b1 PHD_FILE: MSMg01no466_e01.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:41:40 2005	CHROMAT_FILE: MSMg01no466_e01.g1 PHD_FILE: MSMg01no466_e01.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:41:40 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	TCCCTCAAAATTGCGGCGCAAACGATCCTATTCAAAGCAAGCCGGGAATC TGGTTTCCGAAAAATAGGGCGGAGCTGAGCTGGGCTCTTAGCTTAGGGTG TTGATTCCAAGTGCTTATGCCATTAGTGTCGCTATTATGAGGCGGGTTGC CTTATGGTATGAATGGGTTGATGCATTGCCGCGGTCTGCCGCTTCCTCCT ATTTTCGGGATTAAGCATGTGTGCTCCTTTTCTTCCCTGGTAAGACGACA TTTTCCATCTCAGTTCTATGCTCTCTCACTGTATAGCTCGCCGCCCCCTT TTTTTTTTTTCAGAACCCCCCACTTCCTTCCCATCCTTTTATTTTTTTTT CCCCCCACACCAACTCAATCACTCCAACCTGCCTCTTCTTTGCTTTATTC TCTTTTTCTCCCCCCCCCACCTATCTTCCCCCACACCTTATATTTTTCGC CCTCCTCTTTCTCCCTCAACTATCCCTCATTTGTATCTCCCCCCCTTATC CTACCCATCCCTTAATTATATCCCCCTTGCCTCTCCTTGTCCTTTCATCA TCTTTTTCTTCTCCATCTACTATTTGCCCCCCCACGTCTCCACTCCCTAT TTCACTCTATTCTTCTCTCTTTACCTGTATTCCTCTTTCCTCTTTTCTCC CCTCACTTCTTACTTCCCCCCCTCCCTCTTTTTTTTTCTCCCCCCCCCCC TAATTCCCCCTACATCTTTCCCCCTCCCCCATTCGTACACTCCTTCCTCC CCCCCTTACACCCTCTCCCCCTCTTCTCTAC	CCTCCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTACAAATGTAACCAAGAG AGAGCCTGGTGCTTGCACGGCTTCTCTGGCTGCAGAGAGCTGCTGGGGCA CACAGAGTGGTCGGTGTGCACAGTGCCAGCTTGCTATCAGGAACATTTTA CATGAGCATTCTCATCAGATGCTTAACCCCAGGAGAAAGGGGCCTTCCTC TAAGTTAGCTGATAATGCTTTGTTGGAAGATCTTTTCTCGCTTTACATAT GCATTCACTTTTGGAGGCAAATTGTTTAATTCTAACTTACTGTATTCCTA ATGAAGCTTCTCCCACCAAGTATTCCATATTGTCCAGAAGGACAGACAGT GTCCGGAGGATTCCCAGCATAGGACCCATTACCAACCCCAATAGAATTCG CTTTCATATTTCTTACGCTTATACTAATCCTTGCCCCTTTGTATTACATC TTTCTACCTCGCAATCCACCTTTCCCTTACTAACACTCCCCCTCCCCCTG AAAATTATTATCATACGCCGCACCTCCACATTTATACTCCATATATCATA CGACCTCCTATTATCGCTCCTCCCTTCCTCCCTCTTCCTCTCTTCCTCTA TCCTTCTCTCCCAATCTATTCCCTCTTCTCCTCTATCTTTATTCTTCTCT CACTCCTCCACCCTTTTCTCTATATTATATCCCATCCATCACCGCCTGTA TCCCTATGACTCCAATACCTATCATTTCTTATTTACTTTCCCCTTTTTTT TTCCCGCTCAACTATGATTCATGTTATTTT
quality values	Open. Hide. 8 8 8 6 8 8 8 10 11 12 12 27 21 13 10 12 11 11 11 26 26 15 10 9 9 9 8 10 9 9 9 10 12 12 7 6 6 6 6 8 9 12 8 8 10 19 19 18 15 13 10 11 9 10 11 7 6 6 6 7 8 22 10 8 8 6 7 13 6 6 8 8 8 8 9 17 19 14 9 9 12 17 10 10 15 27 21 28 28 37 37 21 19 12 12 10 13 19 15 15 11 12 12 12 12 12 12 15 12 13 12 12 12 24 23 23 18 11 11 13 17 9 9 9 9 10 10 12 11 11 16 12 12 12 10 10 8 6 8 8 8 8 8 8 8 11 11 11 11 11 11 12 11 11 11 9 10 9 9 9 10 10 11 11 10 16 11 10 8 8 8 8 12 11 6 6 6 6 8 8 10 9 8 8 8 8 8 8 10 8 8 8 10 8 10 14 14 19 15 15 16 21 10 9 9 9 9 9 10 11 11 12 12 8 8 6 6 8 8 9 8 8 8 8 10 10 10 10 8 8 8 8 8 8 8 8 8 8 8 9 8 8 8 8 8 8 15 10 9 11 11 9 9 9 8 9 9 8 10 8 12 12 12 15 12 13 10 10 9 9 9 10 10 8 8 8 8 10 10 11 11 11 8 8 8 8 10 8 8 12 13 8 8 10 10 9 9 9 8 8 7 10 16 17 37 37 13 10 15 13 10 10 8 10 13 13 20 13 8 8 8 8 8 8 9 15 12 12 12 13 10 8 8 8 11 8 8 8 8 8 10 8 8 8 10 12 16 25 21 12 11 11 17 18 15 11 8 8 6 6 6 6 8 8 8 8 10 10 10 8 8 8 8 8 9 9 10 8 10 6 6 8 6 8 8 8 8 9 8 8 8 7 7 8 10 10 11 11 13 22 11 8 8 8 8 8 8 8 8 8 10 16 14 16 21 11 8 8 6 6 8 8 10 10 10 11 14 13 15 8 8 6 6 6 8 8 8 8 8 8 8 11 10 10 11 8 10 6 6 8 8 10 10 10 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 8 8 8 8 8 12 10 8 8 10 10 10 10 11 9 8 10 8 10 12 15 19 19 15 12 10 10 10 9 10 9 11 11 12 15 9 9 8 8 8 8 10 10 11 10 8 8 8 10 6 6 8 8 8 8 6 6 8 8 8 10 10 13 8 8 9 9 9 9 7 8 9 9 9 9 13 13 12 13 13 12 12 12 15 10 10 8 8 10 8 8 9 8 8 6 6 8 6 8 8 8 8 11 9 9 9 8 8 8 10 10 10 9 8 8 8 8 8 8 8 8 8 8 8 10 14 10 10 8 8 8 6 6 6 8 10 7 6 6 6 8 8 10 11 7 7 6 6 8 12 13 10 10 12 8 6 6 6 8 8 8 10 10 11 10 10 11 8 10 10 14 15 15 13 8 8 8 8 8 8 9 10 8 8 6 6 8 8 11 11 11 11 10 13 10 10 9 9 9 10 19 19 12 12 12 12 12 19 19 22 15 14 11 11 11 11 8 15 10 12 12 16 16 16 19 13 10 10 8 8 8 8 8 9 12 9 10 10 15 10 9 8 8 8 8 8 8 14 12 24 19 12 9 10 9 9 10 10 12 12 12 12 15 11 10 9 10 10 9 9 9 9 11 17 22 22 20 20 13 14 10 10 13 9 9 10 8 10 10 10 10 15 10 9 9 9 12 15 27 14 13 15 12 12 10 10 10 10 8 8 8	Open. Hide. 7 7 7 10 6 6 7 10 10 10 10 9 9 8 7 7 7 11 15 21 18 18 18 28 28 30 37 37 37 31 31 40 41 25 21 8 6 6 6 7 10 8 17 17 28 28 33 33 39 47 47 47 39 39 47 47 37 48 41 59 59 47 25 20 15 9 9 12 15 19 20 25 25 24 19 28 31 31 36 38 48 48 39 39 39 40 39 43 44 57 48 47 48 39 39 39 42 44 59 59 54 59 59 59 57 57 44 43 37 37 35 47 47 57 57 57 57 57 57 47 44 44 57 47 54 46 57 44 47 43 47 46 57 44 48 48 57 57 57 57 57 57 57 44 44 43 43 43 43 50 57 57 50 50 50 50 41 41 43 50 37 37 43 50 50 57 57 52 52 52 57 57 57 57 52 52 52 57 54 57 57 59 57 57 57 57 43 43 32 44 44 57 57 57 57 57 57 57 57 52 52 52 43 43 43 35 35 43 44 52 52 52 52 52 43 43 29 43 43 50 50 57 50 59 43 36 29 43 43 43 33 43 43 43 41 41 57 44 59 42 42 31 33 35 44 42 48 48 48 44 42 42 35 35 42 42 43 47 47 57 57 54 54 54 48 48 48 48 47 44 41 30 28 32 28 25 25 34 40 46 54 57 57 57 54 47 42 35 35 37 35 35 35 37 37 39 39 35 39 39 43 39 43 43 43 33 37 28 28 28 21 15 13 10 9 9 11 14 18 21 28 28 28 30 37 33 33 33 28 28 28 33 32 36 39 43 43 43 43 27 26 12 12 12 24 24 35 35 35 35 36 36 33 33 28 17 11 6 6 6 13 15 37 28 28 22 22 20 19 10 10 8 8 8 10 13 17 17 17 24 15 14 14 12 21 12 13 12 18 19 13 11 18 10 16 11 13 13 11 12 11 10 11 11 10 10 11 13 13 13 11 9 9 9 9 10 10 13 13 11 11 11 10 8 8 10 12 12 8 8 8 8 8 8 8 8 10 10 10 8 8 8 8 8 8 9 9 9 6 6 6 6 8 8 8 10 6 8 8 8 10 6 6 6 6 8 8 9 9 10 9 10 8 8 10 8 8 8 8 8 8 8 8 9 10 10 11 12 9 10 8 8 8 8 8 8 8 8 8 13 12 9 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 11 11 12 10 10 9 9 9 9 10 8 8 8 9 9 10 10 11 11 11 18 12 12 11 12 11 11 8 8 10 8 8 10 9 8 8 10 8 8 10 10 10 8 6 6 8 6 6 6 6 6 8 8 9 8 10 11 20 18 18 12 8 8 6 7 8 8 10 10 9 12 10 10 8 8 8 8 8 8 8 6 8 8 8 8 8 10 10 8 8 8 8 8 8 10 15 12 13 8 8 8 10 10 15 8 8 8 8 8 7 8 12 10 10 8 10 9 9 9 12 10 8 10 7 6 8 8 8 8 13 8 10 8 8 8 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 12 10 8 8 8 7 7 10 7 6 8 6 6 8 6 6 8 10 10 8 8 8 8 8 10 8 8 8 8 10 10 6 8 8 8 8 8 8 8 10 11 8 8 8 8 8 6 6 8 8 8 8 9 9 10 8 8 9 9 9 9 9 8 8 8 8 8 8 8 8 13 8 8 8 8 12 10 11 8 8 6 6 8 8 8 6 6 8 8 8 8 8 6 8 6 6 8 8 9 11 8 8 8 6 7 7 8 8 8 9 9 9 14 16 15 16 16 18 15 16 13 10 10 9 9 9 12 12 12 9 6 6 6 6 8 8 9 10 8 8 8 8 8 8 8 10 8 8 8 9 10 8 8 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no466_e01.g1 MSMg01no466_e01.g1 CHROMAT_FILE:
MSMg01no466_e01.g1 PHD_FILE: MSMg01no466_e01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:41:40 2005
         (231 letters)



>mm_chr17_81120348_81120978
          Length = 631

 Score =  368 bits (190), Expect = e-106
 Identities = 217/232 (93%), Gaps = 12/232 (5%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctacaaatgtaaccaagagagagcctggtgcttgcacggcttctctggctgcagagagc 60
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctacaaatgtaaccaaaagagagcctggtgcttgcacggcttctctggctgcagagagc 260

                                                                       
Query: 61  tgctggggcacacagagtggtcggtgtgcacagtgccagcttgctatcaggaacatttta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgctggggcacacagagtggtcggtgtgcacagtgccagcttgctatcaggaacatttta 320

                                                                       
Query: 121 catgagcattctcatcagatgcttaaccccaggagaaaggggccttcctctaagttagct 180
           ||||||||||          |||||| |||||||||||||||||||||||||||||||||
Sbjct: 321 catgagcatt----------gcttaaacccaggagaaaggggccttcctctaagttagct 370

                                                               
Query: 181 gataatgcttt-gttggaagatcttttctcgctttacatatgcattcacttt 231
           ||||||||||| || |||||||||||||||||| ||||||||||||||||||
Sbjct: 371 gataatgctttcgt-ggaagatcttttctcgctatacatatgcattcacttt 421


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 231
Length of database: 631
Length adjustment: 9
Effective length of query: 222
Effective length of database: 622
Effective search space:   138084
Effective search space used:   138084
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information